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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OBART03G32400.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
GRAS |
Protein Properties |
Length: 327aa MW: 36546.9 Da PI: 6.5302 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OBART03G32400.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 319.1 | 9.1e-98 | 21 | 327 | 70 | 374 |
GRAS 70 seknsseelaalklfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeelee 160
++ s+e + +k++++++P+ kf+hltaNqaIlea+ ++++Hi+Df+i qG+QW+aLlqaLa+Rpeg+p ++RiTgv sp g + +l +
OBART03G32400.1 21 ARFASDELTLCYKTLNDACPYSKFAHLTANQAILEATGAATKIHIVDFGIVQGIQWAALLQALATRPEGKPtRIRITGVPSPLLGpqPAASLAA 114
33348889999********************************************************88777*********998888999**** PP
GRAS 161 tgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFl 254
t+ rL++fA+ lgv+fef + + + +++l+ +++ v+p+Ea+aVn++lql++ll +s +l +vL+l kslsP vv++ e e+++n++ F+
OBART03G32400.1 115 TNTRLRDFAKLLGVDFEFVP-LLRPVHELNKSDFLVEPDEAVAVNFMLQLYHLLGDSDELVR---RVLRLAKSLSPAVVTLGEYEVSLNRAGFV 204
********************.599******************************88888877...***************************** PP
GRAS 255 erflealeyysalfdsleaklpreseerikvErellgreivnvva.cegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.s 346
+rf++al+yy +lf+sl++ + r+s er+ vEr ++g++i+ +v ega+r+er+ ++W+ +e +GF+pvpls++a +qa+lll +++ +
OBART03G32400.1 205 DRFANALSYYRSLFESLDVAMTRDSPERARVERWMFGERIQRAVGpEEGADRTERMAGSSEWQTLMEWCGFEPVPLSNYARSQADLLLWNYDsK 298
********************************************8356889*****************************************77 PP
GRAS 347 dgyrveeesgslv.lgWkdrpLvsvSaWr 374
y++ e +++ l W++rpL++vSaWr
OBART03G32400.1 299 YKYSLVELPPAFLsLAWEKRPLLTVSAWR 327
78999999999988**************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 327 aa
Download sequence Send
to blast |
MVVRRRLACG TGAPPSAEPD ARFASDELTL CYKTLNDACP YSKFAHLTAN QAILEATGAA 60 TKIHIVDFGI VQGIQWAALL QALATRPEGK PTRIRITGVP SPLLGPQPAA SLAATNTRLR 120 DFAKLLGVDF EFVPLLRPVH ELNKSDFLVE PDEAVAVNFM LQLYHLLGDS DELVRRVLRL 180 AKSLSPAVVT LGEYEVSLNR AGFVDRFANA LSYYRSLFES LDVAMTRDSP ERARVERWMF 240 GERIQRAVGP EEGADRTERM AGSSEWQTLM EWCGFEPVPL SNYARSQADL LLWNYDSKYK 300 YSLVELPPAF LSLAWEKRPL LTVSAWR
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development (By similarity). Involved in environmental abiotic stress resistance. May increase the expression of stress-responsive genes (By similarity). Binds DNA in vitro (PubMed:27081181). {ECO:0000250|UniProtKB:A0A024B7I0, ECO:0000250|UniProtKB:Q9SCR0, ECO:0000269|PubMed:27081181}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC146936 | 0.0 | AC146936.4 Oryza sativa Japonica Group cultivar Nipponbare chromosome 3 clone B1154F06 map near C10769, complete sequence. |
GenBank | AK064022 | 0.0 | AK064022.1 Oryza sativa Japonica Group cDNA clone:001-125-A04, full insert sequence. |
GenBank | AK101603 | 0.0 | AK101603.1 Oryza sativa Japonica Group cDNA clone:J033051K20, full insert sequence. |
GenBank | AK102857 | 0.0 | AK102857.1 Oryza sativa Japonica Group cDNA clone:J033110P03, full insert sequence. |
GenBank | AP014959 | 0.0 | AP014959.1 Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence. |