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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
OBART03G15700.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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| Family |
EIL |
| Protein Properties |
Length: 639aa MW: 70634 Da PI: 4.7481 |
| Description |
EIL family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OBART03G15700.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | EIN3 | 508.5 | 3.1e-155 | 78 | 463 | 1 | 354 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX...XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaa..tgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLr 92
eel++rmw+d+m+lkrlke ++++ +d + +k ++s+eqarrkkmsraQDgiLkYMlk+mevc aqGfvYgiipekgkpv+gasd+Lr
OBART03G15700.1 78 EELERRMWRDRMKLKRLKELQLSRGKDPAGGvvGDPSKPRQSQEQARRKKMSRAQDGILKYMLKMMEVCXAQGFVYGIIPEKGKPVSGASDNLR 171
8*********************9885555448788999******************************************************** PP
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT- CS
EIN3 93 aWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelgl 186
+WWkekv+fdrngpaai+kyqa+n++++ es+l + ++ ++hsl+elqDTtlgSLLsalmqhcdppqrr+plekgv+pPWWPtG+e+ww+elg+
OBART03G15700.1 172 GWWKEKVRFDRNGPAAIAKYQADNAVPGCESELAS-GTGSPHSLQELQDTTLGSLLSALMQHCDPPQRRYPLEKGVPPPWWPTGDEEWWPELGI 264
*********************************66.********************************************************** PP
-TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX.....XXXXXXXXXX CS
EIN3 187 skdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss.....slrkqspkvt 275
+kdqg+ppykkphdlkkawkvsvLtavikhmsp+ie+ir+l+rqsk+lqdkm+ake ++l+v++qee+++ ++ + + +++ +++
OBART03G15700.1 265 PKDQGPPPYKKPHDLKKAWKVSVLTAVIKHMSPDIEKIRRLVRQSKCLQDKMTAKEISTWLAVVKQEEELYLKLNPGARppaptGGITSAISFN 358
****************************************************************************944345442233556666 PP
XXXXXXXXXXXXXXXX.XXXXXXXXXX.............................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXX CS
EIN3 276 lsceqkedvegkkeskikhvqavktta.............................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsete 340
+s++ ++dv++ ++ k ++ ++k+ ++++++kr ++e++ + +++v +tc++ q+++s++
OBART03G15700.1 359 ASSS-EYDVDVVDDCKGDEAGNQKAVVvadptafnlgaamlndkflmpasmkeeatDVEFIQKRS-ASAEPELMLNNRV-YTCNNVQCPHSDYG 449
6655.99***77777777777777766888888*******************************9.899*****99976.************** PP
XXXXXXXXXXXXXX CS
EIN3 341 lifadknsisqney 354
+f d+n++++++y
OBART03G15700.1 450 YGFLDRNARNSHQY 463
************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0001666 | Biological Process | response to hypoxia |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009873 | Biological Process | ethylene-activated signaling pathway |
| GO:0042742 | Biological Process | defense response to bacterium |
| GO:0071281 | Biological Process | cellular response to iron ion |
| GO:0005634 | Cellular Component | nucleus |
| GO:0000976 | Molecular Function | transcription regulatory region sequence-specific DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 639 aa
Download sequence Send
to blast |
MGGGLVMDQG MMFPGVHNFV DLLQQNGGDK NLGFGALVPQ TSSGEQCVMG EGDLVDPPPE 60
SFPDAGEDDS DDDVEDIEEL ERRMWRDRMK LKRLKELQLS RGKDPAGGVV GDPSKPRQSQ 120
EQARRKKMSR AQDGILKYML KMMEVCXAQG FVYGIIPEKG KPVSGASDNL RGWWKEKVRF 180
DRNGPAAIAK YQADNAVPGC ESELASGTGS PHSLQELQDT TLGSLLSALM QHCDPPQRRY 240
PLEKGVPPPW WPTGDEEWWP ELGIPKDQGP PPYKKPHDLK KAWKVSVLTA VIKHMSPDIE 300
KIRRLVRQSK CLQDKMTAKE ISTWLAVVKQ EEELYLKLNP GARPPAPTGG ITSAISFNAS 360
SSEYDVDVVD DCKGDEAGNQ KAVVVADPTA FNLGAAMLND KFLMPASMKE EATDVEFIQK 420
RSASAEPELM LNNRVYTCNN VQCPHSDYGY GFLDRNARNS HQYTCKYNDP LQQSTENKPS 480
PPAIFPATYN TPNQALNNLD FGLPMDGQRS ITELMNMYDN NFVANKNLSN DNATIMERPN 540
AVNPRIQIEE GFFGQGSGIG GSNGGVFEDV NGMMQQPQQT TPAQQQFFIR DDTPFGNQMG 600
DINGASEFRF GSGFNISGAV EYPGAMQGQQ KNDGSNWYY
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor acting as a positive regulator in the ethylene response pathway (PubMed:16786297, PubMed:28829777, PubMed:27701783, PubMed:25995326). Required for the inhibition of root growth by ethylene in etiolated seedlings (PubMed:25995326, PubMed:28829777). Functions upstream of the auxin biosynthetic gene YUCCA8 and directly activates its expression (PubMed:28829777). Functions downstream of the ethylene signaling factor EIN2 in disease resistance against the rice blast fungus (Magnaporthe oryzae) (PubMed:27701783). Binds directly to the promoters of the NADPH oxidases RBOHA and RBOHB, and the jasmonate biosynthetic gene OPR4 to activate their expression during fungal infection (PubMed:27701783). May enhance disease resistance by facilitating reactive oxygen species (ROS) generation and jasmonate biosynthesis with subsequent phytoalexin accumulation during Magnaporthe oryzae infection (PubMed:27701783). Acts as negative regulator of salt tolerance (PubMed:25995326). During salt stress, activates the cation transporter HKT1, which mediates increased sodium uptake in roots, and contributes to sodium accumulation and salt toxicity (PubMed:25995326). Binds directly to the DNA sequence 5'-TGTTACAAATACC-3' in the promoter of the GA20OX2 gene to activate its expression at the transcriptional level during ethylene signaling (PubMed:30002253). Possesses transactivation activity in protoplasts (PubMed:25995326). {ECO:0000269|PubMed:16786297, ECO:0000269|PubMed:25995326, ECO:0000269|PubMed:27701783, ECO:0000269|PubMed:28829777, ECO:0000269|PubMed:30002253}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by infection with the fungal pathogen Magnaporthe oryzae. {ECO:0000269|PubMed:27701783}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC118674 | 0.0 | AC118674.3 Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0093J20, from chromosome 3, complete sequence. |
| GenBank | AC137070 | 0.0 | AC137070.2 Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0035J18, from chromsome 3, complete sequence. |
| GenBank | AK103227 | 0.0 | AK103227.1 Oryza sativa Japonica Group cDNA clone:J033123C05, full insert sequence. |
| GenBank | AP014959 | 0.0 | AP014959.1 Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence. |
| GenBank | DQ153245 | 0.0 | DQ153245.1 Oryza sativa (japonica cultivar-group) EIN3-like protein 1 (EIL1) mRNA, complete cds. |
| Publications
? help Back to Top |
- Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
Science, 2003. 301(5631): p. 376-9
[PMID:12869764] - Yang C, et al.
MAOHUZI6/ETHYLENE INSENSITIVE3-LIKE1 and ETHYLENE INSENSITIVE3-LIKE2 Regulate Ethylene Response of Roots and Coleoptiles and Negatively Affect Salt Tolerance in Rice.
Plant Physiol., 2015. 169(1): p. 148-65
[PMID:25995326] - Yang C, et al.
Activation of ethylene signaling pathways enhances disease resistance by regulating ROS and phytoalexin production in rice.
Plant J., 2017. 89(2): p. 338-353
[PMID:27701783] - Qin H, et al.
The activation of OsEIL1 on YUC8 transcription and auxin biosynthesis is required for ethylene-inhibited root elongation in rice early seedling development.
PLoS Genet., 2017. 13(8): p. e1006955
[PMID:28829777] - Kuroha T, et al.
Ethylene-gibberellin signaling underlies adaptation of rice to periodic flooding.
Science, 2018. 361(6398): p. 181-186
[PMID:30002253]
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