PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 307aa MW: 34004.3 Da PI: 6.5268

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OBART03G15290.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.3	1.1e-10	63	93	4	34
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeek 34 k+ rr+++NReAAr+sR+RKka++++Le OBART03G15290.1 63 QKVLRRLAQNREAARKSRLRKKAYVQQLESS 93 5899************************974 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	9.2E-7	60	123	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	8.875	62	106	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.1E-7	64	94	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.02E-7	65	107	No hit	No description
Gene3D	G3DSA:1.20.5.170	3.3E-8	66	106	No hit	No description
PROSITE pattern	PS00036	0	67	82	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	3.9E-33	146	221	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence Send to blast
MADASSRTDT STVLDTDDKN QMAHHFDINF VKNLIVKVDG QSGAIVPSNS SDRSDRSDKP 60 MDQKVLRRLA QNREAARKSR LRKKAYVQQL ESSKLKLASL EQEINKARQQ GIYISSSGDQ 120 THAMSGNGAM TFDLEYARWL EEQNKQINEL RTAVNAHASD SDLRLIVDGI MAHYDEIFRL 180 KGVAAKADVF HILSGMWKTP AERCFLWLGG FRSSELLKLL VNQLEPLTEQ QLLGLSNLQQ 240 SSQQAEDALS QGMEALQQSL ADTLAGSLGP SGSSGNVANY MGQMAMAMGK LGTLENFLRQ 300 AKDFFET

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in defense response. {ECO:0000250\|UniProtKB:Q7X993}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK242257	0.0	AK242257.1 Oryza sativa Japonica Group cDNA, clone: J075183E21, full insert sequence.
GenBank	AY620414	0.0	AY620414.1 Oryza sativa (japonica cultivar-group) clone OSJNBa0005J15 bZIP transcription factor mRNA, complete cds.
GenBank	HM991173	0.0	HM991173.1 Oryza sativa Japonica Group cultivar Dongjin putative TGA2-like protein 1 mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015632465.1	0.0	transcription factor TGA2.2
Refseq	XP_015632466.1	0.0	transcription factor TGA2.2
Refseq	XP_015632467.1	0.0	transcription factor TGA2.2
Swissprot	Q6IVC3	0.0	TGA22_ORYSJ; Transcription factor TGA2.2
TrEMBL	A0A0D3FHT6	0.0	A0A0D3FHT6_9ORYZ; Uncharacterized protein
STRING	OBART03G15290.1	0.0	(Oryza barthii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP486	38	185

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12250.4	1e-120	TGACG motif-binding factor 6

Publications ? help Back to Top
Chern M,Fitzgerald HA,Canlas PE,Navarre DA,Ronald PC Overexpression of a rice NPR1 homolog leads to constitutive activation of defense response and hypersensitivity to light. Mol. Plant Microbe Interact., 2005. 18(6): p. 511-20 [PMID:15986920] Chern M, et al. Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins. BMC Genomics, 2014. 15: p. 461 [PMID:24919709]