 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OBART03G01030.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
Trihelix |
| Protein Properties |
Length: 288aa MW: 29579 Da PI: 4.2701 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OBART03G01030.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 74.2 | 2.1e-23 | 62 | 119 | 1 | 58 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenln 58
rW++qe+laL+++r+em+ ++r+++lk+plWeevs+k++e g++rs+k+C+ek+en+
OBART03G01030.1 62 RWPRQETLALLKIRSEMDAAFREAALKGPLWEEVSRKLAEMGYNRSAKKCREKFENVD 119
8*******************************************************86 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 288 aa
Download sequence Send
to blast |
MPPFSAAGSE GAPSPISSRP PPPEQAAAAA AAEEQLNGSS LEHDGVLGGE EGDRGGSPAG 60
NRWPRQETLA LLKIRSEMDA AFREAALKGP LWEEVSRKLA EMGYNRSAKK CREKFENVDN 120
NGNGNGWASA NNGGGGSSSG GMQTKASNNG TATAGGLPVV SVAGGNGNGV AATTDNKGSK 180
QVPVAKETAG QRQPQPLAMN HNYGNDRMAD DMDSDSMDDD DDDDEFDDDD DIGGGKMQVQ 240
YEIQRPQLQN QNVVVGRPNA SGGGAPTTPA GPPPPAATSG TSFLACVQ
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK241800 | 0.0 | AK241800.1 Oryza sativa Japonica Group cDNA, clone: J065208I24, full insert sequence. |
