 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OBART02G32430.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
TCP |
| Protein Properties |
Length: 168aa MW: 16029.4 Da PI: 10.5496 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OBART02G32430.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 42.6 | 2.2e-13 | 64 | 94 | 1 | 31 |
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaar 31
aa+k+++++++hTkv+gR+RR+R++a+caar
OBART02G32430.1 64 AAPKRSSTKDRHTKVEGRGRRIRMPALCAAR 94
689**************************99 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 168 aa
Download sequence Send
to blast |
MDVAGDAGGG RRPNFPLQLL EKKEEQPCSS SAAGGGTGPS SAGGNGNNGS GPGGAGGEMQ 60
VRKAAPKRSS TKDRHTKVEG RGRRIRMPAL CAARQLGLGP VGGGGGGGGG GEGHMGILAA 120
LNAYRTQAAT DAAGQQGGGG GGGGSSQQQH GGGGGGGERH QSISTSDS
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP005733 | 1e-151 | AP005733.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OSJNBb0024K03. |
| GenBank | AP005848 | 1e-151 | AP005848.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OSJNBa0078N11. |
| GenBank | AP014958 | 1e-151 | AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. |
