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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OBART02G31930.2 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
E2F/DP |
Protein Properties |
Length: 451aa MW: 50153.1 Da PI: 9.3995 |
Description |
E2F/DP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OBART02G31930.2 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | E2F_TDP | 55.6 | 9e-18 | 54 | 106 | 1 | 58 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnl 58
rk+ksL+ll+++f++l+++ + + + l+++a++L v +rRRiYDi+NVLe++++
OBART02G31930.2 54 RKQKSLGLLCSNFVALYNRDDVESIGLDDAARRL---GV--ERRRIYDIVNVLESVGV 106
79*****************999************...**..**************986 PP
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2 | E2F_TDP | 75.7 | 4.6e-24 | 209 | 289 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71
rkeksL+lltq+f+kl+ + e ++++l+e+ak L+ e ++++k+RR+YDi+NVL++ln i+k ++k+++rw g
OBART02G31930.2 209 RKEKSLGLLTQNFVKLFLTMEVDTISLDEAAKLLLGEghaenSMRTKVRRLYDIANVLSSLNFIDKiqqadSRKPAFRWLG 289
79********************************************************************99*******87 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0032876 | Biological Process | negative regulation of DNA endoreduplication |
GO:0005634 | Cellular Component | nucleus |
GO:0005667 | Cellular Component | transcription factor complex |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 451 aa
Download sequence Send
to blast |
MATAAVMAAV PSSSPADAAE AVVMTEAVPS LPQRQQPVFV EGRGGKLRDH AYSRKQKSLG 60 LLCSNFVALY NRDDVESIGL DDAARRLGVE RRRIYDIVNV LESVGVSSFF LRLSWTGFLF 120 FLARFDSDIC FRFICEKILV RKAKNRYSWI GFGGVPMALR ELKMSDDEDE DKMGDADGDT 180 ESEKLSQPVD NPSDNKPGAP RCRLRSDHRK EKSLGLLTQN FVKLFLTMEV DTISLDEAAK 240 LLLGEGHAEN SMRTKVRRLY DIANVLSSLN FIDKIQQADS RKPAFRWLGS AGKPKAENGV 300 TIAVPPPGKT ISNKRAFGTE LTNIDINRSR LDSTIPKKAK LTQSGGEILK NCKLSVQKQL 360 GQGSKGGFVY GPFHPAGARK QELDNGNKGH TDNVQNWESL AASFRPQYQN QALGDLFAHY 420 MEAWKSWYSE FAQGSSMMQQ HFGMPVINQF L
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Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AK111537 | 0.0 | AK111537.1 Oryza sativa Japonica Group cDNA clone:J013041C09, full insert sequence. |