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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OBART02G27750.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 261aa MW: 26965.8 Da PI: 5.5747 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OBART02G27750.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 51.7 | 2.2e-16 | 71 | 119 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
y+G+r ++ +g+Wv+eIr+p+ + +r++lg++ tae+Aa+a++ a+++l+g+
OBART02G27750.1 71 YRGIR-CR-SGKWVSEIREPR----KaRRIWLGTYPTAEMAAAAYDVAARALRGA 119
9***9.55.6*********94....36*************************995 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0050832 | Biological Process | defense response to fungus |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 261 aa
Download sequence Send
to blast |
MADLTEHPSP TAPPQVQTAG LPAAASPGPA SPHSPSEQGD KTAPGAATAS TMTTASSGEP 60 SPRSSGKHAF YRGIRCRSGK WVSEIREPRK ARRIWLGTYP TAEMAAAAYD VAARALRGAD 120 AVLNFPGATA SRPVPASASP ADIRAAAAAA AAAAAHLERP HGPTGTAYPA TAAAEHHQQQ 180 QQQQYGSGSP AADDVSGYPP MEGGIGNDDF MDEEAIFELP QLLRNMAAGM MMSPPRLSPT 240 TSDVSPEPSE AGESLWSYRD P
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK243146 | 0.0 | AK243146.1 Oryza sativa Japonica Group cDNA, clone: J100032D11, full insert sequence. |
GenBank | AP005775 | 0.0 | AP005775.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OSJNBb0005A04. |
GenBank | AP006060 | 0.0 | AP006060.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, PAC clone:P0135D07. |
GenBank | AP014958 | 0.0 | AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. |