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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OBART02G26590.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 372aa MW: 38167.7 Da PI: 7.19 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OBART02G26590.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 57.7 | 2.9e-18 | 196 | 245 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr ++ +g+Wv+eIr+p++ + r++lg+f tae+Aa+a++ a+++++g
OBART02G26590.1 196 TYRGVRMRS-WGKWVSEIREPRK---KSRIWLGTFATAEMAARAHDVAALAIKG 245
69****998.**********843...6***********************9987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 372 aa
Download sequence Send
to blast |
MEAAAIHAPT TTTSSDSGSC VTNGTREKRE ISKHKQLKRK RSTSPAPPPG CGGGQGQEAA 60 VETDADAGAA GRGGGAGEEE SSSCGGAGAG EGERNRGDAG RHPSYRGVRR RSWGKWSLAL 120 ASSQLAHSLS SSNQLHHHHQ STTARGAMDD SSFGSEPTTS SSGGEAPASP PSTASSSSDG 180 AGGKKKRPRK DGHHPTYRGV RMRSWGKWVS EIREPRKKSR IWLGTFATAE MAARAHDVAA 240 LAIKGRAAHL NFPDLAHELP RPATAAPKDV QAAAALAAAA DFPASSANAG ASNNPDGSDD 300 ASAGSSSPPP PPDAADDALF DLPDLLLDLR YGPPSSGLSC ASSWEDEVGL ISGAGAAAAG 360 VFRLEEPLLW EY
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AJ307662 | 0.0 | AJ307662.1 Oryza sativa genomic DNA fragment, chromosome 2. |
GenBank | AK108830 | 0.0 | AK108830.1 Oryza sativa Japonica Group cDNA clone:002-151-G03, full insert sequence. |
GenBank | AP005006 | 0.0 | AP005006.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, PAC clone:P0519E06. |
GenBank | AP005289 | 0.0 | AP005289.2 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OJ1112_F09. |
GenBank | AP014958 | 0.0 | AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. |