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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OBART02G17450.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 210aa MW: 24019.9 Da PI: 8.6427 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OBART02G17450.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 38.8 | 2.2e-12 | 87 | 128 | 3 | 51 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51
+GV++ k+ +W A I++ +k+++lg+ gt eeAa+++++a+
OBART02G17450.1 87 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGTQEEAARLYDRAAF 128
79**98..47*********4.....5********************985 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 210 aa
Download sequence Send
to blast |
MTRKDSLPVD FPKPSDNENS VEVAHPNIKP FSVHPLPLTK NSDVLLESSN GSDSLKEEKN 60 HYYPGKEIKR RKRHRRKQYV DQEPCIMRGV YFKNMKWQAA IKVDKKQIHL GTVGTQEEAA 120 RLYDRAAFMC GREPNFELSE EEKKELQNYT WKDFLDMTRD TITSKKQRKV GLIRRNKTDS 180 LVGQSDGDTE MINGGGSSHS EDGDAETSAS
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK067156 | 0.0 | AK067156.1 Oryza sativa Japonica Group cDNA clone:J013098A10, full insert sequence. |
GenBank | CT829643 | 0.0 | CT829643.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA114K05, full insert sequence. |
GenBank | CT841725 | 0.0 | CT841725.1 Oryza rufipogon (W1943) cDNA clone: ORW1943C105I17, full insert sequence. |