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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OBART02G07320.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
C2H2 |
Protein Properties |
Length: 185aa MW: 20777.9 Da PI: 11.1275 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OBART02G07320.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 21.7 | 5.4e-07 | 27 | 46 | 1 | 20 |
EEETTTTEEESSHHHHHHHH CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20
++Cp C k+F+r nL+ H+
OBART02G07320.1 27 FSCPVCRKTFNRYNNLQMHM 46
89*****************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 185 aa
Download sequence Send
to blast |
MGLVLLVQEL QYWIPTAAQI LAGATQFSCP VCRKTFNRYN NLQMHMWGHG SQYRRGGTAA 60 LRGAQPTAML RLPCYCCAAG CRNHIDHPRA RPLKDFRTLQ THYRRRHGAR DFACRRCAKR 120 FAVRGDWRTH EKNCGRLWRC ACGAHFRHKR SLNDHARAFG AAHAHAGAAA EDDGRAAAAA 180 AGVLR
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator required for normal differentiation of the ovary transmitting tract cells and pollen tube growth. In Arabidopsis, the transmitting tract facilitates the transport of pollen tubes to the ovules for fertilization (PubMed:17600712). May play a role in the regulation of AGL8/FUL, which is required for normal pattern of cell division, expansion and differentiation during morphogenesis of the silique (PubMed:23515580). Plays a role in replum development by the activation of the homeobox protein KNAT1 (PubMed:25039392). {ECO:0000269|PubMed:17600712, ECO:0000269|PubMed:23515580, ECO:0000269|PubMed:25039392}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK108729 | 0.0 | AK108729.1 Oryza sativa Japonica Group cDNA clone:002-150-D01, full insert sequence. |