PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 278aa MW: 29352.5 Da PI: 4.8647

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OBART02G05680.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	52.7	9.6e-17	123	174	4	58
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 +kr rr+ +NRe+ArrsR+RK+a ++ Le v++L +eN +L k +l++ ++ OBART02G05680.1 123 VKRVRRMVSNRESARRSRKRKQAHLADLESQVDQLRGENASLFK---QLTDANQQ 174 79**************************************9995...55555554 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	7.9E-18	120	184	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.174	122	174	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.59E-13	123	175	No hit	No description
Pfam	PF00170	3.5E-14	123	172	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.3E-13	124	175	No hit	No description
CDD	cd14702	1.89E-23	125	175	No hit	No description
PROSITE pattern	PS00036	0	127	142	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 278 aa Download sequence Send to blast
MDIEAFIHGG SGGGDADADH PLGIFSAADL SGFGFADSST ITGGIPNHIW PQSQNLNARH 60 PAVSTTIESQ SSICAAASPT SATNLNMKES QTLGGTSGSD SESESLLDIE GGPCEQSTNP 120 LDVKRVRRMV SNRESARRSR KRKQAHLADL ESQVDQLRGE NASLFKQLTD ANQQFTTSVT 180 DNRILKSDVE ALRVKVKMAE DMVARGALSC GLGHLGGLSP ALNPRQACRV PDVLAGLDYA 240 GDDPFTAGLS PPEQLQMPGG EVVDAWGWDN HPNGGMSK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	136	142	RRSRKRK
2	136	143	RRSRKRKQ
3	138	143	SRKRKQ

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor that binds to the DNA specific sequence 5'-TGAGTCA-3' found in seed storage protein gene promoters. {ECO:0000269\|PubMed:11133985}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AB053473	0.0	AB053473.1 Oryza sativa mRNA for RISBZ4, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015623252.1	0.0	bZIP transcription factor RISBZ4-like isoform X1
Swissprot	Q6H500	0.0	RSBZ4_ORYSJ; bZIP transcription factor RISBZ4
TrEMBL	A0A0D3F1E5	0.0	A0A0D3F1E5_9ORYZ; Uncharacterized protein
TrEMBL	A0A0E0G250	0.0	A0A0E0G250_ORYNI; Uncharacterized protein
TrEMBL	A0A0E0NAK6	0.0	A0A0E0NAK6_ORYRU; Uncharacterized protein
STRING	ORUFI02G05790.1	0.0	(Oryza rufipogon)
STRING	ONIVA02G06040.1	0.0	(Oryza nivara)
STRING	OBART02G05680.1	0.0	(Oryza barthii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2095	37	96

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24800.1	1e-37	basic leucine zipper 9

Publications ? help Back to Top
Onodera Y,Suzuki A,Wu CY,Washida H,Takaiwa F A rice functional transcriptional activator, RISBZ1, responsible for endosperm-specific expression of storage protein genes through GCN4 motif. J. Biol. Chem., 2001. 276(17): p. 14139-52 [PMID:11133985] Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764]