|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
OBART02G00380.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
Family |
Trihelix |
Protein Properties |
Length: 243aa MW: 25845 Da PI: 4.6591 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OBART02G00380.1 | genome | OGE | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 103.2 | 2e-32 | 57 | 141 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
rW+k+ev aLi++r+ +e+r+++ lk+plWeevs++m++ g++r++k+Ckekwen+nk+++k ke+ kkr + + +tcpyfd+l+
OBART02G00380.1 57 RWPKHEVEALIRVRTGLEDRFQEPGLKGPLWEEVSARMAAAGYRRNAKRCKEKWENINKYFRKAKESGKKR-PAHAKTCPYFDELD 141
8********************************************************************98.99999*******98 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 243 aa
Download sequence Send
to blast |
MQSGYGGVSE FQQYIMDPGA FAMSAPPQPA QAAAAAAAAA AAAAGGQELG APFSSSRWPK 60 HEVEALIRVR TGLEDRFQEP GLKGPLWEEV SARMAAAGYR RNAKRCKEKW ENINKYFRKA 120 KESGKKRPAH AKTCPYFDEL DRLYSRSGSG GGGGSSSAGG NGGEEAKGSS ELLDAVVKYP 180 DVRCAPPGFP FDGEQNEEGR TKDDGDEAHH DGDGDGDEED VGVGVGRATD DHDDQVDESH 240 DDH
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | CP012610 | 0.0 | CP012610.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 2 sequence. |