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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OBART01G45260.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 236aa MW: 24507 Da PI: 4.9022 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OBART01G45260.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 46.6 | 8.4e-15 | 45 | 96 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
+ y+GVr + rWv+e+r+p + +r++lg++ t+e+Aa+a++ a+++++g
OBART01G45260.1 45 PVYRGVRARAGGSRWVCEVREP-----QaqARIWLGTYPTPEMAARAHDVAALAIKG 96
68********9999****9999.....446***********************9987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 236 aa
Download sequence Send
to blast |
MDTEDTSSAS SSSVSPPSSP GGGHHHRLPP KRRAGRKKFR ETRHPVYRGV RARAGGSRWV 60 CEVREPQAQA RIWLGTYPTP EMAARAHDVA ALAIKGRAAH LNFPSLAHTL PRPASTSPSD 120 IQAAAALAAA AAATDQCESS SSAVAAATAT DAEAAESTSS AAASPCAATS SVEENALFDL 180 PDLLLDLSDG LWCSPVWTTA PADQYDAGDD GDDAAAPLLW AEQCWMDAPA APVQPD
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription (By similarity). {ECO:0000250}. |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription. {ECO:0000269|PubMed:17136305}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By calcium ion, methyl-jasmonate (MeJA), cold, drought, and high salinity stress. {ECO:0000269|PubMed:17136305}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CT837654 | 0.0 | CT837654.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN054J01, full insert sequence. |