 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OBART01G34650.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
NAC |
| Protein Properties |
Length: 419aa MW: 47861.6 Da PI: 5.4874 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OBART01G34650.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 92.2 | 8.6e-29 | 124 | 261 | 3 | 127 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknratk.sgyWkatgkdkevls 94
pG+rF P+d el+ ++L++k++g++l+ + ++ +d+y+ +P++L +k+ +e +wy Fs+r++ky++gkr++r+t g+Wk+t k+++vl+
OBART01G34650.1 124 PGIRFVPSDIELILDFLRPKLRGEQLPSYSYMHVCDVYSDHPKELTSKLGPsREGNWYMFSPRNRKYNKGKRPSRSTGqLGFWKSTTKNEAVLD 217
9***************************999**************9655541556********************66538*************9 PP
NAM 95 k..kgelvglkktLvfy.........kgrapkgektdWvmheyr 127
+ ++ l+g k L+++ k +++++ kt W m e+
OBART01G34650.1 218 AlsDNMLIGYKACLTYHeydesmptpKLKKENAIKTPWKMWEFV 261
9888889**********8887777766899999*********96 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 419 aa
Download sequence Send
to blast |
MAESSESAWP QQSQQLQISS TMPAGSAWPE EENLENLEQP LPLLMPSSED HREQQLVPVP 60
WLQQDQDQEW HEQEQFLLLP WLHQDQEWHE QEQFLLLKNQ NQEQLQDQQP LQDQEETRRY 120
LGVPGIRFVP SDIELILDFL RPKLRGEQLP SYSYMHVCDV YSDHPKELTS KLGPSREGNW 180
YMFSPRNRKY NKGKRPSRST GQLGFWKSTT KNEAVLDALS DNMLIGYKAC LTYHEYDESM 240
PTPKLKKENA IKTPWKMWEF VCSNSNRPFD AEEKPMRLND WVLCKVTNKD NKVTTKKFKP 300
QRSKKPKKPK KLQQEEQPQN QGIVIRQPSE SSSASSSHQE IPGSSLPGAG GDAAAAATAA 360
AAAVDPMPLH MIPPSSWNYF STGVTADGIV MDDSTGVDSY GCVDGAGALN FQRNIFYHR
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | CP012609 | 0.0 | CP012609.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 1 sequence. |
