 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OBART01G28750.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
WRKY |
| Protein Properties |
Length: 239aa MW: 25250 Da PI: 8.2945 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OBART01G28750.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 95.2 | 4.4e-30 | 153 | 211 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYG+K+vk+s++pr+YYrC+++gC+vkk+ver+++dp++v+++Yeg Hnh
OBART01G28750.1 153 LDDGYKWRKYGKKSVKNSPNPRNYYRCSTEGCNVKKRVERDKNDPRYVVTMYEGIHNHV 211
59********************************************************5 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 239 aa
Download sequence Send
to blast |
MAAAAAGAST PFNFCRHGSH AEYDAVFSGS WMARRPSAAP HGGGASGSGY GAASYVAPTF 60
GAAFRQQHLD LLDYLSDDQG VPAPPPAAVP SASYVTPAPA MAPAEPVVPD AVAAAGGYPR 120
SVAAAAAAVA GEGRDRTTTD KIAFRTRSDD EILDDGYKWR KYGKKSVKNS PNPRNYYRCS 180
TEGCNVKKRV ERDKNDPRYV VTMYEGIHNH VCPGTVYYAA QDAASGRFFV AGISHPDLN
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK108555 | 0.0 | AK108555.1 Oryza sativa Japonica Group cDNA clone:002-144-E10, full insert sequence. |
| GenBank | AY870609 | 0.0 | AY870609.1 Oryza sativa (japonica cultivar-group) WRKY26 mRNA, complete cds. |
