 |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OBART01G23290.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
WRKY |
Protein Properties |
Length: 292aa MW: 31292.5 Da PI: 7.9021 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OBART01G23290.1 | genome | OGE | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 85.4 | 5.1e-27 | 136 | 194 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D ++WrKYGqK++kgs++pr+YY+C+s gC+++k vers p ++++tY eH h+
OBART01G23290.1 136 SDLWAWRKYGQKPIKGSPYPRGYYKCSSMkGCMARKMVERSPAKPGMLVVTYMAEHCHP 194
799***********************9988***************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 292 aa
Download sequence Send
to blast |
MRGPLLLRAV VVVAMEHFND WDLQAVVRSC SFPQSEPPRV GVGAVRPRPF LLPGSSSSSS 60 SSRAVARARG EDDGKGRHEV MISFPAAAAA STSGAQPRSP SGRKPGIRTP RPKRSKKSQL 120 KKVVYEVPVA DGGVSSDLWA WRKYGQKPIK GSPYPRGYYK CSSMKGCMAR KMVERSPAKP 180 GMLVVTYMAE HCHPVPTQLN ALAGTTRHKL PSSSAAGEGV VKCEDVDGNE LSAMAADGGA 240 EDTAAAADDD GELWPEGMGL ELDEFLGPMD DDVFEFDHVL EDDGVLGRRL SL
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK111416 | 0.0 | AK111416.1 Oryza sativa Japonica Group cDNA clone:002-182-G03, full insert sequence. |
GenBank | AY870601 | 0.0 | AY870601.1 Oryza sativa (japonica cultivar-group) WRKY12 mRNA, complete cds. |