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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OBART01G07120.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 322aa MW: 34901.6 Da PI: 6.6592 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.6 | 4.1e-11 | 188 | 233 | 5 | 50 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 kr +r NR +A+rsR RK+++i eLe+ v +L++e +aL ++ OBART01G07120.1 188 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQTEVSALSPRVA 233 8999*********************************999987765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.6E-14 | 184 | 248 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.76 | 186 | 242 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.83E-11 | 188 | 242 | No hit | No description |
Pfam | PF00170 | 5.1E-10 | 188 | 238 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 4.7E-14 | 188 | 242 | No hit | No description |
CDD | cd14703 | 5.44E-24 | 189 | 239 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 191 | 206 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 322 aa Download sequence Send to blast |
MAQLPPKIPT MATAWPEFGG GHHHHAAHGH HHQRSPSMGA FLAAPLPPFP LPPPAPANGG 60 AQQQQQQHQP SWVDEFLDFS AAKRGAHRRS VSDSVAFLDP VSDDNAGVGA HDFDRLDDDQ 120 LMSMFSDDLQ PPPPQQQPAA PAASASSPSD HNSMNDEKQD KGETDEAQSE CDGATPGQPA 180 SPATVDPKRV KRILANRQSA QRSRVRKLQY ISELERSVTS LQTEVSALSP RVAFLDHQRS 240 LLTLGNSHLK QRIAALAQDK IFKDAHQEAL KKEIERLRQI YHQQSLKNAE SQPADAAPVR 300 GRDNADLIGS EGAAAATPCP HS |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription regulator. {ECO:0000250}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Down-regulated by dehydration and salt stress. {ECO:0000269|PubMed:18065552}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK100944 | 0.0 | AK100944.1 Oryza sativa Japonica Group cDNA clone:J023138F18, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015635844.1 | 1e-179 | basic leucine zipper 2 | ||||
Swissprot | Q5QNI5 | 1e-135 | BZP02_ORYSJ; Basic leucine zipper 2 | ||||
TrEMBL | A0A0D3EL09 | 0.0 | A0A0D3EL09_9ORYZ; Uncharacterized protein | ||||
STRING | OBART01G07120.1 | 0.0 | (Oryza barthii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1322 | 38 | 125 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58120.1 | 2e-95 | bZIP family protein |
Publications ? help Back to Top | |||
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