 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
OBART01G04790.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
bZIP |
| Protein Properties |
Length: 200aa MW: 20197.7 Da PI: 8.9849 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OBART01G04790.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 21 | 7.5e-07 | 123 | 166 | 19 | 62 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 19 rsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62
r R+RKka++ eLe k+k Le N +L +++++l++e +l++
OBART01G04790.1 123 RARERKKAYMTELEAKAKDLELRNAELEQRVSTLQNENNTLRQI 166
88*************************************99986 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 200 aa
Download sequence Send
to blast |
MAAQEQEQEK QQAKTSTTSS LPSSSERSSS SAPNNLKEGG GVESDEEIRR VPEMGGGGGS 60
ASSGAGADER QGKEDGKQQG GGGGGGGAAA GGGQGAGAAG EEARAERRRQ GAEPAEAAAA 120
EPRARERKKA YMTELEAKAK DLELRNAELE QRVSTLQNEN NTLRQILKNT TAHAGKRGGG 180
GGGKGGDGGG GGKKHHFTKS
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 181 | 189 | GGKGGDGGG |
| 2 | 183 | 192 | KGGDGGGGGK |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | CP012609 | 0.0 | CP012609.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 1 sequence. |
| GenBank | CT834891 | 0.0 | CT834891.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA106L05, full insert sequence. |
