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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OB12G24760.1 |
Common Name | LOC102707642 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 261aa MW: 28128.7 Da PI: 6.5328 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OB12G24760.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 51.7 | 2.2e-16 | 93 | 142 | 2 | 54 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr...krfslgkfgtaeeAakaaiaarkkle 54
+++GVr+++ +grW AeIrd + +r++lg+f++ae A a++aa+++++
OB12G24760.1 93 RIRGVRQRR-NGRWSAEIRDT-----TvlgARVWLGTFDSAEAAVLAYDAAARRIR 142
69****999.8*********4.....1234***********************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 261 aa
Download sequence Send
to blast |
MCGRRNGGVG GHPLPAVGDL RGRRRDDEQE QLKVVVVDSD SDDEHEEEMK LEEEFRRYCE 60 TGELQPLIPT KAVLKDHRSK KDKQPAPAAS KNRIRGVRQR RNGRWSAEIR DTTVLGARVW 120 LGTFDSAEAA VLAYDAAARR IRTGGNAKAK PSLPAPAAAS SNKMKKQPPV PAVPKKMKKP 180 VVPAAAEMVP GDGEPAGELA PVLLADALEA TDGWEFEPYY GMSLHGLQGG VYADDVPADE 240 LQGGGAGATV YAADYGCLWS F
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