 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OB11G10130.1 |
| Common Name | LOC102707908 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
G2-like |
| Protein Properties |
Length: 306aa MW: 33281.8 Da PI: 7.6282 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OB11G10130.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 98.8 | 3.8e-31 | 58 | 111 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
prlrWtpeLH +Fv+av++LGG+++AtPk +l+lm+v gL++ hvkSHLQ+YR+
OB11G10130.1 58 PRLRWTPELHLCFVRAVDRLGGQDRATPKLVLQLMNVRGLSIGHVKSHLQMYRS 111
9****************************************************7 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 306 aa
Download sequence Send
to blast |
METAGKEVGS TEGGGGGGGA AAGNDGSSTS SSTVEEEGAE RRTSSSSSVR PYVRSKNPRL 60
RWTPELHLCF VRAVDRLGGQ DRATPKLVLQ LMNVRGLSIG HVKSHLQMYR SKKIDESGQV 120
IGGGSWREEH QYVHHGHGGQ AYNVGHISLP ALLHHRHITA GSGTRPRFGN AWSPWRCHAS 180
YWTHAGHHLF VGSKPYYPPP AAAEAHDAFH TASSHLPDFV VQGSSNHQRA VVLKEIICNE 240
DEGEGPHLNL DLSLNIVNAG PRREKRKREF SLGKKHNEED HDNHTGIIGG DQEEESCATG 300
LSLSLF
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 6e-18 | 59 | 113 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 6e-18 | 59 | 113 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_A | 5e-18 | 59 | 113 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 5e-18 | 59 | 113 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 5e-18 | 59 | 113 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 5e-18 | 59 | 113 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 6e-18 | 59 | 113 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 6e-18 | 59 | 113 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 6e-18 | 59 | 113 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 6e-18 | 59 | 113 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 6e-18 | 59 | 113 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 6e-18 | 59 | 113 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 261 | 268 | RREKRKRE |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK241171 | 1e-134 | AK241171.1 Oryza sativa Japonica Group cDNA, clone: J065117O05, full insert sequence. |
