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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
OB09G17960.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 398aa MW: 42668.4 Da PI: 4.6163 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OB09G17960.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 61.6 | 1.8e-19 | 137 | 186 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+G+r+++ +g+W+AeIrdps+ r++lg++ taeeAa+a++a ++k++g
OB09G17960.1 137 QYRGIRQRP-WGKWAAEIRDPSK---GVRVWLGTYNTAEEAARAYDAEARKIRG 186
69*******.**********965...4*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0001666 | Biological Process | response to hypoxia |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 398 aa
Download sequence Send
to blast |
MCGGAIISGF IPPSAGAAXA AAKKQGRRVT ADVLWPGMRG KAKAGRGFGV EDDFEADFRE 60 FEQGLSDDEA DGGGGEVDDD DDDVVVEVPP PARSVFGGAA KAAAGIAPPT ADGVLTPKLV 120 QHDGPTARSA KRKRKNQYRG IRQRPWGKWA AEIRDPSKGV RVWLGTYNTA EEAARAYDAE 180 ARKIRGKKAK VNFPDELSVA QKPSLKQNAA KQEKLTPPLK TCVDDAFIHP NNADNDLFAM 240 FSFSDKKVPA KPEEPVGILP PVKPLVSTET FEINMLSDES SNSFGSSDFG WDDDILTPDY 300 TSVFVPNAYG EPAYLTGGAP KKMRNNYGVA VPQGNGMPDL TQNMPTFDPG MKYTPLPYVE 360 SSSDESMDSL LQNDATQDGA SNVGIWSLDE LLLAAGAY
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