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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OB09G13350.1 |
Common Name | LOC102708462 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 354aa MW: 39697.3 Da PI: 5.4791 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OB09G13350.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 49.4 | 1.1e-15 | 76 | 125 | 1 | 54 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54
s+y+GVr++ +g+W+AeIrd + r r ++g+f ++eeAa+a+ a ++++
OB09G13350.1 76 SKYRGVRRRA-WGKWAAEIRDpV-----RkSRKWIGTFNSEEEAAAAYLAQSNQFH 125
89*****777.**********44.....55******************88666665 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 354 aa
Download sequence Send
to blast |
MMVPSSQKIR IFCSDPDATD SSDDDDQSAN KDRKDKIMIR EILFSMDNSK ESKTVVKTLV 60 QRDTETFKGT EKEPTSKYRG VRRRAWGKWA AEIRDPVRKS RKWIGTFNSE EEAAAAYLAQ 120 SNQFHAEMMA LKGQSSVSER EDLSSSVTIS CVSSSQSCEQ KIQAQPQAHK RQAHKKLSHS 180 CEQKIQAQPQ ANKRVLAGIN LETVEQKVQA QPQANKRASA GINLETVEQK IQAQPQTHKR 240 LLVEINHETV DENLPNVSST HKCKEISVDA SLGQIDEVPT SNFVSHANEF RQIDVFPVSD 300 FVGMTDEPPG DDYIGLADIS HLPLPTQDPK FDLDAELNWD GFDFASLEQL LNVL
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