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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OB08G30790.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 221aa MW: 24061.2 Da PI: 7.2877 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OB08G30790.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 58.6 | 1.5e-18 | 43 | 93 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+ ++GVr++ +g+WvAeIr+p + r +r +lg+f ta +Aa+a++ a+++l+g
OB08G30790.1 43 CPFRGVRQRT-WGKWVAEIREP---N-RgARLWLGTFNTALDAARAYDSAARALYG 93
679****999.**********8...3.35***********************9986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 221 aa
Download sequence Send
to blast |
MENGESCCGR RKQQEAKTRK CCPLRRSRKG CMKGKGGPEN QRCPFRGVRQ RTWGKWVAEI 60 REPNRGARLW LGTFNTALDA ARAYDSAARA LYGDCARLNL LVAAAGHTST QQQQHMISSS 120 AATTTTTIIG SKHESCSSND SNSPSPMPML LADYGGVMMH PAEEEEDFET YVTRLPKAED 180 FGLEGFQEVP LDVLDEAGGG ISIWDLSICP ADIMAAAATA K
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcriptional activator that binds to the DNA sequence 5'-[AG]CCGAC-3' of the cis-acting dehydration-responsive element (DRE). {ECO:0000250}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Not induced by high-salt and drought stresses. {ECO:0000269|PubMed:20049613}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK108143 | 1e-123 | AK108143.1 Oryza sativa Japonica Group cDNA clone:002-139-E11, full insert sequence. |
GenBank | AP004623 | 1e-123 | AP004623.3 Oryza sativa Japonica Group genomic DNA, chromosome 8, PAC clone:P0705A05. |
GenBank | AP005411 | 1e-123 | AP005411.3 Oryza sativa Japonica Group genomic DNA, chromosome 8, BAC clone:OSJNBa0044E16. |
GenBank | AP014964 | 1e-123 | AP014964.1 Oryza sativa Japonica Group DNA, chromosome 8, cultivar: Nipponbare, complete sequence. |
GenBank | AY339375 | 1e-123 | AY339375.1 Oryza sativa (japonica cultivar-group) Ap22 mRNA, complete cds. |
GenBank | CP012616 | 1e-123 | CP012616.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 8 sequence. |