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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
OB08G23260.1 |
| Common Name | LOC102705002 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
G2-like |
| Protein Properties |
Length: 294aa MW: 32270.2 Da PI: 4.9342 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OB08G23260.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 91.9 | 5.5e-29 | 20 | 73 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
+rlrWt +LHerFv av++LGG+++AtPk++l +m +gLtl+h+kSHLQkYR
OB08G23260.1 20 TRLRWTGQLHERFVLAVAELGGADRATPKSVLTAMAEPGLTLYHLKSHLQKYRQ 73
7****************************************************6 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 294 aa
Download sequence Send
to blast |
MSSQQQQQQY AGEAAAGART RLRWTGQLHE RFVLAVAELG GADRATPKSV LTAMAEPGLT 60
LYHLKSHLQK YRQAVSRGGN GGGPNDRSSS SDRQPADYDG DGTADEPRTI AYDVAGDAKA 120
PCDSSRTMMQ MQREVQRKLQ EQIEVQKHLQ LRMEAQGRYL QSVLRRAQQV LADHSLASSP 180
EAAKTELSEL SSAVEIECVS SPSPPRRYRR PAAAADSCVT TSSSSEGESK AAGSKRLHTS 240
DCTVEQPVQG KRAFPYLQRQ HQTEEEDEEQ DDDDEQEEYA GAEDGSSSEI DLNR
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 1e-16 | 18 | 77 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 1e-16 | 18 | 77 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_A | 1e-16 | 19 | 74 | 1 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 1e-16 | 19 | 74 | 1 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 1e-16 | 19 | 74 | 1 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 1e-16 | 19 | 74 | 1 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 1e-16 | 18 | 77 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 1e-16 | 18 | 77 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 1e-16 | 18 | 77 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 1e-16 | 18 | 77 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 1e-16 | 18 | 77 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 1e-16 | 18 | 77 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK070338 | 0.0 | AK070338.1 Oryza sativa Japonica Group cDNA clone:J023049D17, full insert sequence. |
