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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
OB08G21740.1 |
| Common Name | LOC102711008 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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| Family |
LBD |
| Protein Properties |
Length: 345aa MW: 38237.6 Da PI: 4.2929 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OB08G21740.1 | genome | OGE | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 88.7 | 7.5e-28 | 1 | 83 | 18 | 100 |
DUF260 18 lapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100
+apyfpa+q+++f n+h+lFG+sn+lk+l++l++e +dam++l+y+Ae+ra+dPv G+++vi +l++ql+ + ael+++ ++
OB08G21740.1 1 MAPYFPADQQRRFLNAHRLFGVSNILKTLRHLKPELCDDAMRTLIYQAEMRAHDPVGGCCRVIADLERQLDAETAELNTVLHH 83
59***************************************************************************998665 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 345 aa
Download sequence Send
to blast |
MAPYFPADQQ RRFLNAHRLF GVSNILKTLR HLKPELCDDA MRTLIYQAEM RAHDPVGGCC 60
RVIADLERQL DAETAELNTV LHHLALCRQA AATGASASVA AIMPAGMLDD PCADLDVTSS 120
NQPLLLSAEQ EVVDALYANQ EPDATILHGD DGHHNQNGSQ HEQHHGQQQR LYDYFYYDST 180
TGDDVSSKPN LDINVDGMQH FDFDTGYDVE HKLELTSDQM PVVVHEPNQI HHKEFETKAA 240
PSFVDALDMR QEMVDVNTEI EVKEIVDMNA DLDVKEMVDM NVKTTMVDVN ADIDVVKTVV 300
DVNDDIGVKE ELQEVGNGKI VDAGKATQMA ESSSNCRLGL GFSSF
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