|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
OB07G29080.1 |
Common Name | LOC102703138 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
Family |
GeBP |
Protein Properties |
Length: 376aa MW: 40444.8 Da PI: 6.0844 |
Description |
GeBP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OB07G29080.1 | genome | OGE | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF573 | 107.4 | 1e-33 | 72 | 171 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskk 94
lfqrlw+eeDeiv+L+G+ +f+a +g+ +++ d+d fye +++++++ +sksqlveK+rrLK+K++++v++ + sg+ +sf+++h+q ife+++
OB07G29080.1 72 LFQRLWTEEDEIVILRGFAEFTAARGTafASHQyDTDPFYEDMRGRLQLGFSKSQLVEKLRRLKRKYRNCVSRlRGSGSAFSFRSPHEQAIFEIARN 168
79************************99877778***************************************8889******************** PP
DUF573 95 iWg 97
iW+
OB07G29080.1 169 IWR 171
**8 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 376 aa
Download sequence Send
to blast |
MLPAAAAAMS FPDADVDDDS DDGDFTDAPL IDPTFPNPTS SSAAAAPVPP AAGGGGGGVG 60 SSSGGGGERR PLFQRLWTEE DEIVILRGFA EFTAARGTAF ASHQYDTDPF YEDMRGRLQL 120 GFSKSQLVEK LRRLKRKYRN CVSRLRGSGS AFSFRSPHEQ AIFEIARNIW RPANKHGREG 180 DSDDEDAAAA AAVTPAAIPV NNTSPNGEVK SPTSGRQRRR RRVADFAAAA AAAPATVPAT 240 TNMVQPLHPV QVPVSVPVKM DDMLPALSQT TMPITVTMEG SEPLRLPVMP PQPAILDAEK 300 SCLTPLFKEM VRAVINIGSN PFGAQLPEPP HGLPMEGEKW RKQRILELEV YLKRIELLKD 360 QVKATLEELK SSAPGT
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AP003749 | 0.0 | AP003749.3 Oryza sativa Japonica Group genomic DNA, chromosome 7, BAC clone:OJ1136_D11. |
GenBank | AP014963 | 0.0 | AP014963.1 Oryza sativa Japonica Group DNA, chromosome 7, cultivar: Nipponbare, complete sequence. |
GenBank | CP012615 | 0.0 | CP012615.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 7 sequence. |
Best hit in Arabidopsis thaliana ? help
Back to Top |
Hit ID |
E-value |
Description |
AT5G28040.1 | 2e-43 | DNA-binding storekeeper protein-related transcriptional regulator |