PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OB07G20950.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 216aa MW: 22804.5 Da PI: 9.5801 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 24.7 | 6.7e-08 | 55 | 125 | 5 | 67 |
NAM 5 frFhPtdeelvveyLkkkvegkklel..eevikev.diykvePwdLpkkvka.....eekewyfFskrdkk 67 + F P+d+el+++ L++k++g +++ +e + v d+y + P +L +++++ + + wyfF++ ++ OB07G20950.1 55 VPFLPQDSELLDCLLRPKIAGAHIDSrfTELVGYVdDVYALPPDQLAARHEGapgegGGRVWYFFAPLGTA 125 5699*******************65521455788889*********853333344447789****986654 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.83E-9 | 55 | 128 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 216 aa Download sequence Send to blast |
MAATLPRTSD SDWTDSDSNS IQFAYKLAPS SSARRRIHLA SSSSHRLKTT VMAPVPFLPQ 60 DSELLDCLLR PKIAGAHIDS RFTELVGYVD DVYALPPDQL AARHEGAPGE GGGRVWYFFA 120 PLGTARGRTE NGGEGGAELL LCKIFRAPRA ARAEPGSPSS CKSVSASPSA SCSGTGSGGR 180 KRKAEGDHLE ASTTLDARAA LPAKSRSTQA GRGQHR |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | OB07G20950.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
TrEMBL | J3ML13 | 1e-154 | J3ML13_ORYBR; Uncharacterized protein | ||||
STRING | OB07G20950.1 | 1e-155 | (Oryza brachyantha) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP15395 | 10 | 17 |