 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
OB07G11040.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
G2-like |
| Protein Properties |
Length: 394aa MW: 42273.7 Da PI: 9.9985 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OB07G11040.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 102.8 | 2.1e-32 | 231 | 286 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
k+r++W+peLH++Fv+a++qLGG+++AtPk+i+elmkv+gLt+++vkSHLQkYRl+
OB07G11040.1 231 KARRCWSPELHRKFVSALQQLGGPQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 286
68****************************************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 394 aa
Download sequence Send
to blast |
MGLEVGEIGV GADLSLDLKM FAAKSVGRAR DSPASAMGDC IKRLEEEMGK IEVFRRELPL 60
CVRLLADVID VMKEEVGKKG GDREEEEEDA GDKSNWMSTA QLWSGNSGRD AADPEHLVRS 120
SQKQDKGRIS SEARSDGGGA FVPFKAVGSG APAFTRPKPS LIRKEDMAYD VRMPDLSLLS 180
PPAAPADESR RQVVGFAQAA ARAAAMAASS PALSLQAQSH SAAQQQQQAR KARRCWSPEL 240
HRKFVSALQQ LGGPQVATPK QIRELMKVDG LTNDEVKSHL QKYRLHNRRV PSSTIVNQPI 300
VLMGGLCYIP QEQSSSQSGS PEGPLHFSGS GTAGGGSFSR PRAQPVAAAA HRWRPSAARR 360
KMAGLRAMAG NDQGVAASEI QSFGGRLRRG GDEQ
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 8e-14 | 231 | 284 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 8e-14 | 231 | 284 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 8e-14 | 231 | 284 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 8e-14 | 231 | 284 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK070421 | 0.0 | AK070421.1 Oryza sativa Japonica Group cDNA clone:J023048M12, full insert sequence. |
