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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
OB06G34350.1 |
| Common Name | LOC102708259 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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| Family |
G2-like |
| Protein Properties |
Length: 474aa MW: 51876.5 Da PI: 6.5641 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OB06G34350.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 100.8 | 8.8e-32 | 268 | 322 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
k+rlrWt eLHerFv+av++L G+ekAtPk +l+lmkv+gLt++hvkSHLQkYRl
OB06G34350.1 268 KARLRWTLELHERFVKAVNKLEGPEKATPKGVLKLMKVEGLTIYHVKSHLQKYRL 322
68****************************************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 474 aa
Download sequence Send
to blast |
MSSQSVVALK QITAPDKVMD TCPSTQHSAH KLFDVKPDHQ GSTNDNLSSS SQSSNIKIEL 60
IRSSSLPNIL PFQKRSSESE PESPMSHVSH PNVSEPVYSN SSTFCTSLFS SSSMESEPCR 120
KLGTLPFLPH PPKYEQQVSA GYSSSSSLLL SGDGDIGSGH DELEQSDDLK DFLNLSGGDA 180
SDGSFHGENN AMAFAEQMEF QFLSEQLGIA ITDNEESPRL DDIYGTPPQL SSLPVSSCSN 240
QSVHNVGSPV KVQLSSPRKS SGSATTNKAR LRWTLELHER FVKAVNKLEG PEKATPKGVL 300
KLMKVEGLTI YHVKSHLQKY RLAKYLPETK EDKKASSEDK KAQSGSSGND SAKKKNLQVA 360
EALRLQMEVQ KQLHEQLEVQ RQLQLRIEEH ARYLQRILEE QHKATTTTSS SSSSKPQPES 420
PEPPPKQKEA ESEAGATAAP HQPDAGTERR SPPVGSKKRA RVHADDGDDE PQRS
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 1e-24 | 268 | 325 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 1e-24 | 268 | 325 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 1e-24 | 268 | 325 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 1e-24 | 268 | 325 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 1e-24 | 268 | 325 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 1e-24 | 268 | 325 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 1e-24 | 268 | 325 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 1e-24 | 268 | 325 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor involved in phosphate starvation signaling (PubMed:26082401). Binds to P1BS, an imperfect palindromic sequence 5'-GNATATNC-3', to promote the expression of inorganic phosphate (Pi) starvation-responsive genes (PubMed:26082401). Functionally redundant with PHR1 and PHR2 in regulating Pi starvation response and Pi homeostasis (PubMed:26082401). {ECO:0000269|PubMed:26082401}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated under Pi starvation conditions. {ECO:0000269|PubMed:26082401}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK060648 | 0.0 | AK060648.1 Oryza sativa Japonica Group cDNA clone:001-027-G12, full insert sequence. |
| GenBank | AK067950 | 0.0 | AK067950.1 Oryza sativa Japonica Group cDNA clone:J013127L15, full insert sequence. |
