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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OB06G29780.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 534aa MW: 55741.3 Da PI: 5.0704 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OB06G29780.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 37.3 | 6.9e-12 | 90 | 142 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkkleg 55
s+y+GVrw k+ r+ Ae n+ + r++lg+f++ eeAa a++ a++ l+g
OB06G29780.1 90 SCYRGVRWSKSGTRFIAE---T--NNplsATDRVWLGTFDSGEEAAWAYDTAARVLRG 142
79****************...6..6675344***********************9998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 534 aa
Download sequence Send
to blast |
MEPREVTVRK FTEVLVDYAQ QVAELAVWRV EKRADDKGKG VAPAEGAGAG EVVVVPVVAG 60 KRRVGKAFVA PAVTVGGSGS GRRRKDGNGS CYRGVRWSKS GTRFIAETNN PLSATDRVWL 120 GTFDSGEEAA WAYDTAARVL RGSKATTNFS DAPPTPGLTP EMRAMLEFFA NACSERGEGG 180 QVPCSLALST SARAIEAPAN GSPLLLLEAP PPPPPDLEPG VRVQRGGQRG RTPSPKTVTE 240 NDPSASSSAL VLVPAAVPDR ALTSDVAPVM ARALPSAVAT EAPLLLLPPP APALVAGAAF 300 QQGGGERGRG RGRGGGRGRA PGSLRGGGGG RGPGRGRSAN DPRFSTLYAH GGFSSSPESS 360 LAAPPPPPPP TAPAASHSFY QPVIPPGGVI TNYAVHEAPD FDPDTFYDEL EDDDDDEPVL 420 LLRKKTELLG VHTSPDRPQR SMEVITEEDD LMHVDVVPSS SQGAGAAPSS SSQGTSNVRA 480 LLNFDLNEPA LDDDDDDDAG LLMLTCNVAS QQVNLSGFLM IKELSLLRSS RKFN
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 308 | 317 | RGRGRGGGRG |