|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
OB06G17380.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
Family |
ERF |
Protein Properties |
Length: 341aa MW: 36625.1 Da PI: 6.7869 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OB06G17380.1 | genome | OGE | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 30.2 | 1.2e-09 | 172 | 200 | 3 | 35 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgk 35
y+GVr+++ +g+WvAeIr p++ r+r +lg+
OB06G17380.1 172 YRGVRQRH-WGKWVAEIRLPKN---RTRLWLGT 200
9******9.**********965...5*****98 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 341 aa
Download sequence Send
to blast |
MAAIDLYKYQ LSSSSSSSSD QELMKALEPF IRSASPTSTS TSAPFSYTSA STFTSTPFSY 60 SPLPQESYYL PASSSYAAIP PPTIATTTSF SELPPLPPSS SSYTSPAAYP QANTASGLAQ 120 LGPEQIQQIQ VQFLMQQQQQ RGMLASAAAY LGPRAQPMKQ AGAAASAAGK MYRGVRQRHW 180 GKWVAEIRLP KNRTRLWLGT XXXXXXXXXX XXXXXXXXXX XXXXXXXXAG PLHSSIDAKL 240 TAICQTLAAA PPASKKSTAA AARPDSPKGS ASTTTTTSEG DESAISACSP PLPPLPPSQP 300 APPPPPEMTN LDFTEAPWDE SDAFHLYKFP SWEIDWDSIL S
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AP004727 | 1e-143 | AP004727.2 Oryza sativa Japonica Group genomic DNA, chromosome 6, PAC clone:P0516A04. |
GenBank | AP014962 | 1e-143 | AP014962.1 Oryza sativa Japonica Group DNA, chromosome 6, cultivar: Nipponbare, complete sequence. |