|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
OB06G16410.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
Family |
ERF |
Protein Properties |
Length: 205aa MW: 21309.8 Da PI: 4.36 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OB06G16410.1 | genome | OGE | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 30.7 | 7.6e-10 | 15 | 62 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
ykGVr ++ +g+Wv+eIr p + +r lg ae Aa+a++aa ++l+g
OB06G16410.1 15 YKGVRMRS-WGSWVSEIRAP-----NkARRGLGPPPPAEAAARAYDAALLCLKG 62
9****998.**********9.....44999*********************998 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 205 aa
Download sequence Send
to blast |
MVKTAARHGG GKRAYKGVRM RSWGSWVSEI RAPNKARRGL GPPPPAEAAA RAYDAALLCL 60 KGSAAADDLN FPVRLPFDLP AAAMSPKSIQ RVAAAAANAG SSSAADGFSG VNDSGSASAS 120 EASTPACSSS DASPLSSPET VISDDVDYSL LADIEAFFQS PKCMEYAMMD PCSAFFTPAA 180 PLATEEECCW EEEGDIALWS FSSLD
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AP004687 | 1e-158 | AP004687.2 Oryza sativa Japonica Group genomic DNA, chromosome 6, PAC clone:P0021C04. |
GenBank | AP014962 | 1e-158 | AP014962.1 Oryza sativa Japonica Group DNA, chromosome 6, cultivar: Nipponbare, complete sequence. |
GenBank | CP012614 | 1e-158 | CP012614.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 6 sequence. |