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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OB06G15590.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 361aa MW: 39967.1 Da PI: 4.3554 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OB06G15590.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 59.2 | 9.6e-19 | 113 | 162 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+++G+r+++ +g+W+AeIrdp++ r++lg+f ++eeAa+a++a +++++g
OB06G15590.1 113 QFRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNSPEEAARAYDAEARRIRG 162
69*******.**********954...4************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 361 aa
Download sequence Send
to blast |
MCGGAILSDI LPPPPRRVTA GDLWLEKQQK KKKTQKARRL PRRDEEEEEE EEDFEADFEE 60 FEGESGESEV EVEVESDVDE AKPRGQRRRG LNTTVAGADG PAARSAKRKR KNQFRGIRQR 120 PWGKWAAEIR DPRKGVRVWL GTFNSPEEAA RAYDAEARRI RGKKAKVNFP DGAPVASQSQ 180 HTEPSSVNMP TFSVEEKPAV MSAGNNTMYN TNAYAYRAVE YTLEEPFVQT QNVSFVPTMN 240 VIGDSFLNLS SDQGSNSFGC SDFSQENDTK TPDITSMLAP TLTEVDESAF LQNNASGAMV 300 PPVMGNASVD LADLEPYMKF LIDGGSDESI DTLLSSDGSQ DVASSMDLWS FDDMPVSAEF 360 Y
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcriptional activator that may be involved in defense signaling pathway. Binds in vitro to the DNA sequence 5'-AGCCGCC-3' of the GCC-box element found in pathogenesis-related (PR) gene promoters. The transcriptional activation is enhanced in vitro by the presence of MPK12/BWMK1. {ECO:0000269|PubMed:12913152}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AF190770 | 0.0 | AF190770.1 Oryza sativa EREBP-like protein (tsh1) mRNA, complete cds. |
GenBank | AK060742 | 0.0 | AK060742.1 Oryza sativa Japonica Group cDNA clone:001-032-E01, full insert sequence. |
GenBank | AK069833 | 0.0 | AK069833.1 Oryza sativa Japonica Group cDNA clone:J023031B06, full insert sequence. |
GenBank | AP003514 | 0.0 | AP003514.3 Oryza sativa Japonica Group genomic DNA, chromosome 6, PAC clone:P0698A06. |
GenBank | AP004280 | 0.0 | AP004280.3 Oryza sativa Japonica Group genomic DNA, chromosome 6, PAC clone:P0648E08. |
GenBank | AP014962 | 0.0 | AP014962.1 Oryza sativa Japonica Group DNA, chromosome 6, cultivar: Nipponbare, complete sequence. |
GenBank | DQ849289 | 0.0 | DQ849289.1 Oryza sativa (indica cultivar-group) ethylene-responsive factor 15 (ERF-15) mRNA, complete cds. |
GenBank | EU837257 | 0.0 | EU837257.1 Oryza sativa Japonica Group clone KCS063A06 EREBP transcription factor mRNA, complete cds. |
GenBank | FJ693711 | 0.0 | FJ693711.1 Oryza sativa Japonica Group cultivar IRAT109 putative ethylene responsive element binding factor (Os06g0194000) gene, complete cds. |
Publications
? help Back to Top |
- Kim CY, et al.
Identification of rice blast fungal elicitor-responsive genes by differential display analysis. Mol. Plant Microbe Interact., 2000. 13(4): p. 470-4 [PMID:10755311] - Koo SC, et al.
OsBWMK1 mediates SA-dependent defense responses by activating the transcription factor OsWRKY33. Biochem. Biophys. Res. Commun., 2009. 387(2): p. 365-70 [PMID:19607808] - Iwamoto M,Takano M
Phytochrome-regulated EBL1 contributes to ACO1 upregulation in rice. Biotechnol. Lett., 2011. 33(1): p. 173-8 [PMID:20872166] - Serra TS, et al.
OsRMC, a negative regulator of salt stress response in rice, is regulated by two AP2/ERF transcription factors. Plant Mol. Biol., 2013. 82(4-5): p. 439-55 [PMID:23703395] - Jisha V, et al.
Overexpression of an AP2/ERF Type Transcription Factor OsEREBP1 Confers Biotic and Abiotic Stress Tolerance in Rice. PLoS ONE, 2015. 10(6): p. e0127831 [PMID:26035591] - Lourenço TF, et al.
The Rice E3-Ubiquitin Ligase HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENE1 Modulates the Expression of ROOT MEANDER CURLING, a Gene Involved in Root Mechanosensing, through the Interaction with Two ETHYLENE-RESPONSE FACTOR Transcription Factors. Plant Physiol., 2015. 169(3): p. 2275-87 [PMID:26381316]
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