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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OB05G20700.1 |
Common Name | LOC102715207 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 377aa MW: 40676.6 Da PI: 4.7231 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OB05G20700.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 59.7 | 7.1e-19 | 85 | 135 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
++++GVr++ +g+WvAeIr+p + r r +lg+f tae Aa+a++ a+++++g
OB05G20700.1 85 CDFRGVRQRT-WGKWVAEIREP---N-RlSRLWLGTFPTAEAAARAYDDAARAMYG 135
689****999.**********8...2.58************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009408 | Biological Process | response to heat |
GO:0009414 | Biological Process | response to water deprivation |
GO:0009651 | Biological Process | response to salt stress |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 377 aa
Download sequence Send
to blast |
MTVDRKTAIM PPPVEMPPVQ PGRKKRPRRS RDGPTSVAET IKRWAELNKQ LEHGSQGPKQ 60 ARKAPAKGSK KGCMKGKGGP ENTHCDFRGV RQRTWGKWVA EIREPNRLSR LWLGTFPTAE 120 AAARAYDDAA RAMYGPMART NFPRQHVPAA SAQVALATVK GVLPSGLSAC ESGTSTHVAP 180 AAVQDVLPSG LSACESTTTS NNHSDVASTL HKPEFSEISS PLRAAPAVLV DGSLYEDKVG 240 SITYDENIVS QQCAPPEAET SSGRGEEVFE PLEPIASLPE DQEDCFDIDE MLKMMEDDPM 300 NKGSWQPNGE GLTNGGGVDP MGMGEIGQDE PLYLEGVDPA MLENMLKSFD SGPAWLSEDP 360 AMFISGGFED AEFFQGF
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3' of the cis-acting dehydration-responsive element (DRE). Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription. Involved in drought and heat-shock stress tolerance. {ECO:0000269|PubMed:20049613}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By heat shock, high-salt and drought stresses. {ECO:0000269|PubMed:20049613}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | JF915843 | 0.0 | JF915843.1 Oryza sativa dehydration responsive element binding protein 2B isoform a (DREB2B) mRNA, complete cds, alternatively spliced. |