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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OB03G42970.1 |
Common Name | LOC102708234 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
NAC |
Protein Properties |
Length: 368aa MW: 40624.7 Da PI: 7.7674 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OB03G42970.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 162.8 | 1.3e-50 | 39 | 170 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk... 95
pGfrFhPtdeelv++yL++kv++k+l++ e+ike+diyk++PwdLpk+ + + +ewyfF+ r +ky+++ r+nr+t sg+Wkatg d++++s+
OB03G42970.1 39 LPGFRFHPTDEELVTFYLRRKVARKSLSI-EIIKEMDIYKHDPWDLPKASTVGGEEWYFFCLRGRKYRNSIRPNRVTGSGFWKATGIDRPIYSAaav 134
69***************************.89***************8778899***************************************9888 PP
NAM 96 ...kgelvglkktLvfykgrapkgektdWvmheyrl 128
+ge +glkk+Lv+y+g+a kg+ktdW+mhe+rl
OB03G42970.1 135 ssnSGESIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 170
8888888***************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0005992 | Biological Process | trehalose biosynthetic process |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0006561 | Biological Process | proline biosynthetic process |
GO:0009718 | Biological Process | anthocyanin-containing compound biosynthetic process |
GO:0010120 | Biological Process | camalexin biosynthetic process |
GO:0042538 | Biological Process | hyperosmotic salinity response |
GO:1900056 | Biological Process | negative regulation of leaf senescence |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 368 aa
Download sequence Send
to blast |
MVTSKEFARE AMVVDKIKTD GEVLLAGGGD EEEEGDVVLP GFRFHPTDEE LVTFYLRRKV 60 ARKSLSIEII KEMDIYKHDP WDLPKASTVG GEEWYFFCLR GRKYRNSIRP NRVTGSGFWK 120 ATGIDRPIYS AAAVSSNSGE SIGLKKSLVY YRGSAGKGTK TDWMMHEFRL PPAAAAANAS 180 PCMQEAEVWT ICRIFKRSVT YRKQQQVWRP PAPATVTIKA PPPGDSSSNT GSFESDGGDE 240 YMNRGLAPAV AAQQQQHGRQ TGTMSHGGFF FSDSVHHHGH SHHKLHHGQW GSLQMAPAPE 300 QKPLNTSTPM TMIAFHHQND HSFASASATA AAAAAATDFY KDGYLAEIAR MMEVADPSPT 360 GFFDCRYA
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 3e-49 | 40 | 203 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 3e-49 | 40 | 203 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 3e-49 | 40 | 203 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 3e-49 | 40 | 203 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 3e-49 | 40 | 203 | 22 | 174 | NAC domain-containing protein 19 |
3swm_B | 3e-49 | 40 | 203 | 22 | 174 | NAC domain-containing protein 19 |
3swm_C | 3e-49 | 40 | 203 | 22 | 174 | NAC domain-containing protein 19 |
3swm_D | 3e-49 | 40 | 203 | 22 | 174 | NAC domain-containing protein 19 |
3swp_A | 3e-49 | 40 | 203 | 22 | 174 | NAC domain-containing protein 19 |
3swp_B | 3e-49 | 40 | 203 | 22 | 174 | NAC domain-containing protein 19 |
3swp_C | 3e-49 | 40 | 203 | 22 | 174 | NAC domain-containing protein 19 |
3swp_D | 3e-49 | 40 | 203 | 22 | 174 | NAC domain-containing protein 19 |
4dul_A | 3e-49 | 40 | 203 | 19 | 171 | NAC domain-containing protein 19 |
4dul_B | 3e-49 | 40 | 203 | 19 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds to the 5'- RRYGCCGT-3' consensus core sequence. Central longevity regulator. Negative regulator of leaf senescence. Modulates cellular H(2)O(2) levels and enhances tolerance to various abiotic stresses through the regulation of DREB2A. {ECO:0000269|PubMed:22345491}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Up-regulated by H(2)O(2), paraquat, ozone, 3-aminotriazole and salt stress. {ECO:0000269|PubMed:22345491}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK073539 | 0.0 | AK073539.1 Oryza sativa Japonica Group cDNA clone:J033041C24, full insert sequence. |
Publications
? help Back to Top |
- Shahnejat-Bushehri S,Nobmann B,Devi Allu A,Balazadeh S
JUB1 suppresses Pseudomonas syringae-induced defense responses through accumulation of DELLA proteins. Plant Signal Behav, 2016. 11(6): p. e1181245 [PMID:27159137] - Shahnejat-Bushehri S,Tarkowska D,Sakuraba Y,Balazadeh S
Arabidopsis NAC transcription factor JUB1 regulates GA/BR metabolism and signalling. Nat Plants, 2016. 2: p. 16013 [PMID:27249348] - Shahnejat-Bushehri S, et al.
Arabidopsis NAC Transcription Factor JUNGBRUNNEN1 Exerts Conserved Control Over Gibberellin and Brassinosteroid Metabolism and Signaling Genes in Tomato. Front Plant Sci, 2017. 8: p. 214 [PMID:28326087] - Sakuraba Y,Bülbül S,Piao W,Choi G,Paek NC
Arabidopsis EARLY FLOWERING3 increases salt tolerance by suppressing salt stress response pathways. Plant J., 2017. 92(6): p. 1106-1120 [PMID:29032592] - Ebrahimian-Motlagh S, et al.
JUNGBRUNNEN1 Confers Drought Tolerance Downstream of the HD-Zip I Transcription Factor AtHB13. Front Plant Sci, 2017. 8: p. 2118 [PMID:29326734]
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