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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OB03G24880.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 202aa MW: 21939.6 Da PI: 8.8205 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OB03G24880.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 51.5 | 2.5e-16 | 25 | 76 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
s y+GV+++++ grW A+I + +k +lg+f t+eeAa+a++ a++k++g
OB03G24880.1 25 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAALKFRG 76
57****************988532...5************************997 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 202 aa
Download sequence Send
to blast |
MQNMSKQELV ASLRRKSSGF SRGASIYRGV TRHHQHGRWQ ARIGRVAGNK DLYLGTFATE 60 EEAAEAYDIA ALKFRGVNAV TNFEPSRYNL EAISQSDLPI SISGRRQNSS NKPAPEAEGH 120 ITLSSPPISQ QSSNSGSAAP CLLHNLLQFQ PCGPPQALPL PGYSYAEPGF CWPFGDGEQK 180 VQLNSKVEMA NGFLLHLGNA AN
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that promotes cell proliferation, differentiation and morphogenesis, especially during embryogenesis. {ECO:0000269|PubMed:12172019}. |
UniProt | Transcription factor that promotes cell proliferation, differentiation and morphogenesis, especially during embryogenesis. {ECO:0000269|PubMed:12172019}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK109839 | 1e-142 | AK109839.1 Oryza sativa Japonica Group cDNA clone:002-148-D11, full insert sequence. |