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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OB03G16120.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 315aa MW: 34451.1 Da PI: 7.2995 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OB03G16120.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 50.6 | 4.7e-16 | 160 | 199 | 2 | 45 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAaka 45
+++G+r+++ +g+W+AeIrdp + +r++lg+f t+eeAa+a
OB03G16120.1 160 HFRGIRQRP-WGKWAAEIRDPH----KgTRVWLGTFNTPEEAARA 199
69*******.**********72....35***************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 315 aa
Download sequence Send
to blast |
MFPSHPLTHP QAWRLQMYIF SLPRWQRTTN SQKKRDEHDK KRSKRSGRPK PRAMCGGAIL 60 AEFIPPQAGA PASKRVTAGH LWPAGAKNGG GKSKKKSFAE ADDFEAAFEQ FHDDSDFDDA 120 EEDDDGGLFG SRSLVFTSKS PAHDGRAARA ASKKKRGRRH FRGIRQRPWG KWAAEIRDPH 180 KGTRVWLGTF NTPEEAARAL VDLTTAPAPV VAPPPLMASS FTDSATSESG GSPSKKPRAD 240 DASSEGSVGG SSSDTLGFTD ELEFDPFLLF QLPFSDGYES IDSLFTGGDA VQDANSANND 300 MNSVNLWSFD EFPLF
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC229740 | 4e-76 | AC229740.1 Oryza minuta clone OM__Ba0228D20, complete sequence. |
GenBank | AC229761 | 4e-76 | AC229761.1 Oryza minuta clone OM__Ba0159K04, complete sequence. |