|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
OB03G16110.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
Family |
ERF |
Protein Properties |
Length: 297aa MW: 33012.9 Da PI: 7.8269 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OB03G16110.1 | genome | OGE | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 60.9 | 2.9e-19 | 100 | 150 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++y+GVr ++ +grW+AeIrdp++ +r++lg++g+aeeAa a+++ +++++g
OB03G16110.1 100 KKYRGVRCRP-SGRWAAEIRDPRK---GRRVWLGTYGSAEEAAMAYDREARRIRG 150
59*****999.7*********954...4************************998 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 297 aa
Download sequence Send
to blast |
MCGGAILAEF IPARVHRSLT AAELLPEASS SAERRPARKR KASSSHDDFE AEFELFEDND 60 DDAELELSDE EEALAVPYSD VSSSSRRRPR MAAGRETSGK KYRGVRCRPS GRWAAEIRDP 120 RKGRRVWLGT YGSAEEAAMA YDREARRIRG QAARLNFPRP REGGCSPRRT TNRPRWAIDL 180 NLPAAVSDDD DMAVDAAVAG NAGRAGRGSE PVDSKIKKLI KHGPHVESAM PPELIMEDAS 240 CSSAARGALQ LQYAALISDC DRELEEIAAL ERDVERRRRQ VCEQRRHFVR KASLLLD
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AC229740 | 9e-68 | AC229740.1 Oryza minuta clone OM__Ba0228D20, complete sequence. |
GenBank | AC229761 | 9e-68 | AC229761.1 Oryza minuta clone OM__Ba0159K04, complete sequence. |