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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OB03G14110.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
E2F/DP |
Protein Properties |
Length: 332aa MW: 36596.4 Da PI: 5.8911 |
Description |
E2F/DP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OB03G14110.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | E2F_TDP | 85.6 | 3.7e-27 | 76 | 162 | 3 | 71 |
E2F_TDP 3 eksLrlltqkflklleksee.givtlnevakeLvse.....................dvknkrRRiYDilNVLealnliekkekneirwkg 71
+++Lr++++k ++ek+e+ g++t+neva+eLv+e d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
OB03G14110.1 76 GRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEfadpnnsilppdpdnpnaqqyDEKNIRRRVYDALNVLMAMEIISK-DKKEIQWKG 162
689*******...*****999************************************************************.*******98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0042023 | Biological Process | DNA endoreduplication |
GO:0005634 | Cellular Component | nucleus |
GO:0005667 | Cellular Component | transcription factor complex |
GO:0005737 | Cellular Component | cytoplasm |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 332 aa
Download sequence Send
to blast |
MVSGVAHLPD DXXXXXXXAE APAAAAGAAT STPASENTFL RLNDLDIHGD DAPSSQAPTS 60 KKKKRGARAV GPDKGGRGLR QFSMKVCEKV ESKGRTTYNE VADELVAEFA DPNNSILPPD 120 PDNPNAQQYD EKNIRRRVYD ALNVLMAMEI ISKDKKEIQW KGLPRTSIND IEDLQTELLG 180 LKSRIEKKNA YLQELQDQFV GMQKLIQRNE RLYGSGNIPS GGVALPFILV QTRPHATVEV 240 EISEDMQLVH FDFNSTPFEL HDDSYVLKAM SSCGEQNDGI HDLIPNGGES SSMPNIYRQQ 300 MQQPARATNG TARLPSSPPI PGILKGRVKH EH
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Functional Description ? help
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Source |
Description |
UniProt | Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. The complex DPB/E2FC restricts cell division and lateral root initiation and may function as a negative regulator of E2F-regulated genes. The interaction with SKP2A is controlled by auxin. {ECO:0000269|PubMed:11891240, ECO:0000269|PubMed:16920782}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AY224589 | 0.0 | AY224589.1 Oryza sativa (japonica cultivar-group) isolate 31182 E2F dimerization factor mRNA, complete cds. |