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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OB02G41640.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 246aa MW: 27462.9 Da PI: 12.7094 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OB02G41640.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 26.3 | 1.9e-08 | 29 | 57 | 1 | 33 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfsl 33
++ykGVr++k +g+Wv+eIr p++ r r++l
OB02G41640.1 29 KKYKGVRRRK-WGKWVSEIRLPNS---RDRIWL 57
59*****998.**********943...488887 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 246 aa
Download sequence Send
to blast |
MMSSWSSSSS SPASAVETEG AGISDRGAKK YKGVRRRKWG KWVSEIRLPN SRDRIWLXXX 60 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 120 XXXXXXXXXX XXXXXXXXXX XXXXRGAHGR GLPALAVAGV RHTRGGGAGR ARRRQHRLAP 180 GHGAPAAALL AARVGHQCLR LLAGSAAGAG VRRGHGRRGG QPRCKRFSLE LRHARLLLLP 240 ILINMH
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP004257 | 5e-41 | AP004257.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OJ1369_G08. |
GenBank | AP014958 | 5e-41 | AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. |