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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OB02G40600.1 |
Common Name | LOC102722553 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 231aa MW: 24327 Da PI: 5.4198 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OB02G40600.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 65.7 | 9.4e-21 | 110 | 161 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
s+y+GVr+++ +g+W+AeIrdp+ + +r++lg f+tae+Aa+a++ a+++++g+
OB02G40600.1 110 SKYRGVRRRP-WGKWAAEIRDPV----KgARVWLGPFDTAEDAARAYDVAALEFRGH 161
89********.**********75....44**************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 231 aa
Download sequence Send
to blast |
MVPRLERAGG GFHLPNSERE DSLFIRALIS VVSGDTAVPA LLPATAAACG GVGGELVLAA 60 GSSSSDEGEE GEEEECSGAP AAASATGGVE GGVGKRRQRR RGAAGDGEGS KYRGVRRRPW 120 GKWAAEIRDP VKGARVWLGP FDTAEDAARA YDVAALEFRG HRAKLNFPAS SPAQRPRSLP 180 VPDSLRENCG SNASSPVQHA PEHAPAARDK EIWDGLQEIM MLDDGTFWSM P
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 94 | 100 | KRRQRRR |
2 | 95 | 100 | RRQRRR |