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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OB01G49350.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 394aa MW: 40913.2 Da PI: 6.3396 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OB01G49350.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 47.8 | 3.7e-15 | 193 | 244 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g
OB01G49350.1 193 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 244
57****************988532...5************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 394 aa
Download sequence Send
to blast |
MATVNNWLAF SLSPQELPPS QANSALISAA TTGDASAAAD VCFNIPQDWS TRGSELSALV 60 AEPKLEDFLG GISFSEQHHG KGGVIPSSAA ACYANSGSSV GYLYPSSSSL QFADSVMVAS 120 SAVVHDGVSG GIDGQGGMRL ICGTTAAEEK GKLARVGKVN NYEKELEEMK HMTRQEFVAS 180 LRRKSSGFSR GASIYRGVTR HHQHGRWQAR IGRVAGNKDL YLGTFSTQEE AAEAYDIAAI 240 KFRGLNAVTN FDMSRYDVKS ILDSGALPAM QHAGGGHGLG SIDNASLEHS TGSNSVVYNG 300 DAGGYMMPMS AASAAATVGV SHDQHAAQGG HGDGGKHVQM GYDNYLVGAD AYGGAGRMPS 360 WTTTPASAPA ATSSSDMTGV CHGGAQLFSV WNDT
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK240892 | 1e-164 | AK240892.1 Oryza sativa Japonica Group cDNA, clone: J065030K10, full insert sequence. |