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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OB01G16440.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 167aa MW: 18166 Da PI: 5.66 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OB01G16440.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 50.2 | 6.5e-16 | 61 | 104 | 3 | 50 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaar 50
y+GVr + +g+Wv+eIr+p++ + r++lg+f +e+Aa+a+++a
OB01G16440.1 61 YRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFPCPEMAARAHDHAE 104
9****998.**********843...6*******************985 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 167 aa
Download sequence Send
to blast |
MAASEQSSES SAATTTTSYS SCSPASTTSS RSRAADGGGG AKRQQVGKRK RDGEAAAAAS 60 YRGVRMRAWG KWVSEIREPR KKSRIWLGTF PCPEMAARAH DHAEPSTENE QQQPATAAAQ 120 VAVAELVFDE LAPLWMEDVV DFGPSDHCWT AYDALDHVGF QPLLWEY
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK108873 | 8e-67 | AK108873.1 Oryza sativa Japonica Group cDNA clone:002-152-C11, full insert sequence. |
GenBank | AP003197 | 8e-67 | AP003197.4 Oryza sativa Japonica Group genomic DNA, chromosome 1, BAC clone:B1015E06. |
GenBank | AP014957 | 8e-67 | AP014957.1 Oryza sativa Japonica Group DNA, chromosome 1, cultivar: Nipponbare, complete sequence. |
GenBank | AY339374 | 8e-67 | AY339374.1 Oryza sativa (japonica cultivar-group) Ap21 mRNA, complete cds. |