 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OB01G15640.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
MYB_related |
| Protein Properties |
Length: 249aa MW: 27701.8 Da PI: 7.8397 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OB01G15640.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 22.2 | 3.3e-07 | 2 | 37 | 12 | 47 |
HHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 12 lvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
++ + ++lG+g+W+ I+r + Rt+ q+ s+ qky
OB01G15640.1 2 FLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKY 37
77789******************************9 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 249 aa
Download sequence Send
to blast |
MFLMGLQKLG KGDWRGISRN FVVSRTPTQV ASHAQKYFIR QTNSSRRKRR SSLFDMVPEM 60
PMDESPVVAE QLMLCSTQDE TTNSNQLPML HLVKQKEPEF ARHLSDLQLR KHEDSEFTEP 120
SLAALDLEMN HTVPFKAKSV LTMPTFYPAL IPVPLTLWPP NVANVDEAGT THEILKPTPV 180
NGKEINKADE VVGMSKLSIG EGISDTIQPS ALSLQLTGPT NTRQSAFHVN PPMAGPDLIK 240
RNNSPIHAV
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK071611 | 0.0 | AK071611.1 Oryza sativa Japonica Group cDNA clone:J023105I20, full insert sequence. |
