 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Niben101Scf26981g00007.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
WRKY |
| Protein Properties |
Length: 366aa MW: 40757.4 Da PI: 6.7939 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Niben101Scf26981g00007.1 | genome | BTI | - |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 104.4 | 6.2e-33 | 89 | 145 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
dDgynWrKYGqK+vkgse++rsYY+Ct+++Cpv+kkvers d++v+ei+Y+g+Hnh+
Niben101Scf26981g00007.1 89 DDGYNWRKYGQKQVKGSEYSRSYYKCTHSNCPVRKKVERSL-DGQVTEIIYKGQHNHQ 145
8****************************************.***************8 PP
|
| 2 | WRKY | 55 | 1.6e-17 | 273 | 310 | 22 | 59 |
EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 22 rsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
rsYY+Cts+gC+ +k+ver+a+dp++v++tYeg+Hnh+
Niben101Scf26981g00007.1 273 RSYYKCTSQGCNLRKHVERAATDPTAVVTTYEGKHNHD 310
9************************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 366 aa
Download sequence Send
to blast |
MSLQQVLAQF TTQAAQAQSQ MHIRPDYPSS STAAATSLSQ FQSLASNAAA NQQIPPPALN 60
PNIVKESSDV SLSDQRSEPA SFAVDKPADD GYNWRKYGQK QVKGSEYSRS YYKCTHSNCP 120
VRKKVERSLD GQVTEIIYKG QHNHQPPQSS KRSKESGNPN GNYNLQGSYE PSTEGLAGNF 180
NKPKEGETSY SLRMKDHESS QATHDQISGS SDSEEVGDTE TRVDGRDIDE RESKWRAVEI 240
QTSEAACSHR TVTEPRIIVQ TTSDVDLLDD GYRSYYKCTS QGCNLRKHVE RAATDPTAVV 300
TTYEGKHNHD VPAARNSSHN TTNNSMSQLR PHNSVVDKPA PMRRTDFQNN EQQPIALLRF 360
KEEQIT
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By salicylic acid and during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |
