PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf25868g00011.1
Organism
Nicotiana benthamiana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 443aa    MW: 48974.1 Da    PI: 9.3139
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf25868g00011.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.41.2e-11331374548
                               CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                    bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                               +r +r++kNRe+A rsR RK+a++ eLe +v++L++  ++L+k+
  Niben101Scf25868g00011.1 331 RRRKRMIKNRESAARSRDRKQAYTLELEAEVAKLKEIKQELQKK 374
                               689*********************************99999876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.6E-11327404IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.151329374IPR004827Basic-leucine zipper domain
CDDcd147071.27E-21331385No hitNo description
Gene3DG3DSA:1.20.5.1706.9E-12331378No hitNo description
SuperFamilySSF579596.99E-9331377No hitNo description
PfamPF001701.9E-9331376IPR004827Basic-leucine zipper domain
PROSITE patternPS000360334349IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 443 aa     Download sequence    Send to blast
MGSHLNFKNF VDTSQPESSD GKPMNNDNFS LARQSSVYSF TFDELQSACG LGKDFGSMNM  60
DDLLKNIWTA EESQAMSSFV AGGNVSAPVG NLQRQGSLTL PRTISQKTVD EVWKDFQKET  120
VNANDGSAPG ASNFGQRQST LGEMTLEDFL VRAGAVREDM QPTRYSKDVT FTSGFTQPSS  180
NNSSLNITFQ QATQNPQQLS NQIEANNIFN VVNTTSSQQK PQQAQPLFPK QTTVAFASPM  240
QLGNTAQLAS LGTRAPIVGM SNPSVNTSII QGSIMQGGVM DMVGLHNGVT SVKGGSPGNL  300
DPPSLSPSPY ACGEGGRGRR SCTSFEKVVE RRRKRMIKNR ESAARSRDRK QAYTLELEAE  360
VAKLKEIKQE LQKKQAEFIE KQKNQAYTLE LEAEVSKLKE IKQELQKKQA EFIEKQKNQL  420
LEKMNMPWEN KLICLRRTVT GPW
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009631699.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 6 isoform X2
TrEMBLA0A1J6IHK90.0A0A1J6IHK9_NICAT; Abscisic acid-insensitive 5-like protein 6
TrEMBLA0A1S3XYM70.0A0A1S3XYM7_TOBAC; ABSCISIC ACID-INSENSITIVE 5-like protein 4 isoform X2
STRINGXP_009791697.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7762497
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34000.22e-84abscisic acid responsive elements-binding factor 3