PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Scf19016g00005.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 301aa MW: 34568.2 Da PI: 7.0541 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 168.2 | 2.7e-52 | 8 | 132 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWka 85 lppGfrFhPtdeelv++yL++k++++++ + +i+e+d+yk++PwdLp+ + +ekewyfFs+rd+ky++g+r+nra+ +gyWka Niben101Scf19016g00005.1 8 LPPGFRFHPTDEELVMHYLCRKCASQTIAV-PIIAEIDLYKYDPWDLPHLALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKA 91 79*************************999.88***************7656689****************************** PP NAM 86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 tg dk++ + + +g+kk Lvfy g+apkgekt+W+mheyrl Niben101Scf19016g00005.1 92 TGADKPIGH--PKPMGIKKALVFYAGKAPKGEKTNWIMHEYRL 132 *******99..789***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.09E-62 | 4 | 159 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 59.855 | 8 | 159 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.9E-27 | 9 | 132 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009611 | Biological Process | response to wounding | ||||
GO:0009788 | Biological Process | negative regulation of abscisic acid-activated signaling pathway | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 301 aa Download sequence Send to blast |
MTAAELQLPP GFRFHPTDEE LVMHYLCRKC ASQTIAVPII AEIDLYKYDP WDLPHLALYG 60 EKEWYFFSPR DRKYPNGSRP NRAAGTGYWK ATGADKPIGH PKPMGIKKAL VFYAGKAPKG 120 EKTNWIMHEY RLADVDRSAR KNNNSLRLDD WVLCRIYNKK GSIEKNQLSN RKMTASYKDM 180 VESPEDRKPE ILPPLPPPQP QQQQVHNDFF YLDPSDSVPK IHSDSSCSEH VLSPEFTCER 240 EVQSEPKLTD WEKATLDLPF NYMDATTGAT TVDNSLLGSQ LQSSYQMSPL QDMFMHLHKP 300 F |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 5e-83 | 4 | 165 | 11 | 174 | Stress-induced transcription factor NAC1 |
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Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00121 | DAP | Transfer from AT1G01720 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019247695.1 | 0.0 | PREDICTED: NAC domain-containing protein 2-like | ||||
Swissprot | Q39013 | 1e-144 | NAC2_ARATH; NAC domain-containing protein 2 | ||||
TrEMBL | A0A1J6J545 | 0.0 | A0A1J6J545_NICAT; Nac domain-containing protein 2 | ||||
STRING | XP_009629774.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1239 | 24 | 81 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-137 | NAC family protein |