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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Niben101Scf18356g00007.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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| Family |
M-type_MADS |
| Protein Properties |
Length: 158aa MW: 18751.9 Da PI: 9.9608 |
| Description |
M-type_MADS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Niben101Scf18356g00007.1 | genome | BTI | - |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | SRF-TF | 29.5 | 9.6e-10 | 7 | 40 | 5 | 38 |
SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEE CS
SRF-TF 5 nksnrqvtfskRrngilKKAeELSvLCdaevavi 38
n+ +r++ + ++++KKAeELS+ C++e+ +i
Niben101Scf18356g00007.1 7 NEGRRSIILQEMMKTLFKKAEELSIVCGVEIVLI 40
56678888888889*****************998 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 158 aa
Download sequence Send
to blast |
MKRKNINEGR RSIILQEMMK TLFKKAEELS IVCGVEIVLI KKLLNLSGHQ ETNLNNSLDK 60
PLRGSTHEQF LRNEIEKNVR NIDQQKIEEK EIEHLFKQLY LGKKSVFELD KRQLIGVRNL 120
AMKAKEKEYD SSYKINVLGY QLITYHFDLL HFIMYKIN
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