PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Niben101Scf15752g00020.1

Organism

Nicotiana benthamiana

Taxonomic ID

4100

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 513aa MW: 57709.9 Da PI: 4.4108

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Niben101Scf15752g00020.1	genome	BTI	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	45.9	1.9e-14	6	125	11	128
NAM 11 deelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkdkev 92 d+e v+ +L k v g ++++ ++i+ v++y +P++L +++ +e++ y F++ +k++a+gk+ +r++ g Wk k+k+v Niben101Scf15752g00020.1 6 DDEHVMSHLLKFVCGIPTRC-HHIRLVQLYGNkKPSELFQQL-EEKSTDYVFTQLKKTSARGKNYKRSIVggGGSWKVLDKSKPV 88 788999*********999.7899965497555.334566**************54434889****** PP NAM 93 lskkgelvglkktLvfykg.rapkgektdWvmheyrl 128 ++kkg ++g kk++ f + ++++ ++ W m+ey+l Niben101Scf15752g00020.1 89 FDKKGCVIGFKKSFRFDDTnDHSSDSRIVWSMKEYSL 125 ************955267777899*****97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	18.876	1	152	IPR003441	NAC domain
SuperFamily	SSF101941	1.03E-16	6	151	IPR003441	NAC domain
Pfam	PF02365	2.6E-5	7	125	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 513 aa Download sequence Send to blast
MEPSFDDEHV MSHLLKFVCG IPTRCHHIRL VQLYGNKKPS ELFQQLEEKS TDYVFTQLKK 60 TSARGKNYKR SIVGGGGSWK VLDKSKPVFD KKGCVIGFKK SFRFDDTNDH SSDSRIVWSM 120 KEYSLNDTIV KLLRQRRQIR HEDYVVCRIT KTVNSCASSQ NVVPLAISGE NSVANVTTQD 180 PLMLGHLNYV PTSCLSQDQE KASVISWAPS PVDQFQFQEN QESELSNFWN ENECMRVDSL 240 LTEESNTAPL IQLPLISTEE AECSAAVEPT LLSPFNETFE PLTEEELAIF DNLLVQAQKD 300 QETASVVCRI TKTNVPLAIS GDNSVGNVMS QEPQMLGHLN YVPTSCLSQD QEKASIISWT 360 PSPVDQFQFQ ENQESELSNF RNENKCISVD SLLAKESNAA PLIQLPLIST EEAECSAAVA 420 PTYTALPSFN EPFEPLTEED LAFFDKSFMQ KDQETASVRP KNDIATYHKE LDAYAAEILK 480 LNPPLVPDIP QYLEDECPLF PEDFYIGPTA LWS

Sequence ? help Back to Top

Protein Sequence Length: 513 aa Download sequence Send to blast

MEPSFDDEHV MSHLLKFVCG IPTRCHHIRL VQLYGNKKPS ELFQQLEEKS TDYVFTQLKK  60
TSARGKNYKR SIVGGGGSWK VLDKSKPVFD KKGCVIGFKK SFRFDDTNDH SSDSRIVWSM  120
KEYSLNDTIV KLLRQRRQIR HEDYVVCRIT KTVNSCASSQ NVVPLAISGE NSVANVTTQD  180
PLMLGHLNYV PTSCLSQDQE KASVISWAPS PVDQFQFQEN QESELSNFWN ENECMRVDSL  240
LTEESNTAPL IQLPLISTEE AECSAAVEPT LLSPFNETFE PLTEEELAIF DNLLVQAQKD  300
QETASVVCRI TKTNVPLAIS GDNSVGNVMS QEPQMLGHLN YVPTSCLSQD QEKASIISWT  360
PSPVDQFQFQ ENQESELSNF RNENKCISVD SLLAKESNAA PLIQLPLIST EEAECSAAVA  420
PTYTALPSFN EPFEPLTEED LAFFDKSFMQ KDQETASVRP KNDIATYHKE LDAYAAEILK  480
LNPPLVPDIP QYLEDECPLF PEDFYIGPTA LWS

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009615661.1	1e-163	PREDICTED: uncharacterized protein LOC104108353
STRING	XP_009615661.1	1e-163	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA18021	2	4

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04060.1	2e-07	NAC domain containing protein 46