PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf13361g01009.1
Organism
Nicotiana benthamiana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 382aa    MW: 42339.1 Da    PI: 7.6849
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf13361g01009.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_123.11.6e-073597163
                              XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                    bZIP_1  1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                              e+e +r  r   NRe+Ar   +R++a  eeL++k++ L +eN+ Lkk+ e   ke++ lk+++
  Niben101Scf13361g01009.1 35 EREERRLYRVLANRESARQTIRRRQATHEELTKKAADLASENENLKKRKELAAKEYELLKNKN 97
                              566677778888***********************************************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.1E-83599IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.94437100IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1707.9E-43996No hitNo description
CDDcd147024.87E-114390No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    Send to blast
MPRGQESELK TSHRHALNYL PIASRKSRQN LTEEEREERR LYRVLANRES ARQTIRRRQA  60
THEELTKKAA DLASENENLK KRKELAAKEY ELLKNKNTSL RVRVAKIEKA EAEETDGGSK  120
SKPVEISTTN TAATSNPTPN PILPSLFNQS PITPFFWPSI VQPFNAFLLQ CGSQNISDIT  180
SVLSSPTSGE LNSINRQESS NPENPLFVLP VPCLIPFHPQ SSSPFLPWSS TLTDKHSETS  240
SVHQCSTSYL NTENNQAVIA HEAEADAPQS IKATQRDFLH ESALRFPPEG GVSKGSLQPS  300
SSHVQLGTSE RVCYQLDNAP DIGAVSCTVG HVTDTSEMTS QESITSSSKN PVDAHATAEA  360
RKRRKELLKL RSQHSDQFGP NH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1360365RKRRKE
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009611161.10.0PREDICTED: uncharacterized protein LOC104104722
TrEMBLA0A1S3Y9390.0A0A1S3Y939_TOBAC; uncharacterized protein LOC107773596
STRINGXP_009611161.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA54171724
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.13e-24bZIP family protein